Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: C25D7.8

expand all nodes | collapse all nodes | view schema

Name Class

C25D7.8EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceC25D7
StructureSource_exons1111
162905
DB_infoDatabaseKEGGKEGG_id3.4.19.12
SwissProtUniProtAccQ9XVR6
UniProtUniProtAccQ9XVR6
AlphaFoldentryQ9XVR6
UniProt_GCRPUniProtAccQ9XVR6
NCBI_proteinGI_numberGI:3874447
TREEFAMTREEFAM_IDTF314145
Protein_idCHROMOSOME_VCAB027721
DB_remarkOTUB-1 protein; contains similarity to Pfam domain PF10275 (Peptidase C65 Otubain); contains similarity to Interpro domains IPR042468 (Peptidase C65, otubain, subdomain 1), IPR016615 (Ubiquitin thioesterase Otubain), IPR019400 (Peptidase C65, otubain), IPR042467 (Peptidase C65, otubain, subdomain 2), IPR038765 (Papain-like cysteine peptidase superfamily)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00007718
Corresponding_transcriptC25D7.8.1
Corresponding_proteinCE08394
Corresponding_PCR_productcenix:51-g1
cenix:68-e5
mv_C25D7.8
sjj_C25D7.8
Corresponding_oligo_set (14)
Matching_cDNA (26)
RNAi_resultWBRNAi00041176
WBRNAi00029190
WBRNAi00041177
WBRNAi00062133
WBRNAi00011156
Microarray_results (16)
Brief_identificationUbiquitin thioesterase otubain-likeAccession_evidenceUniProtSP:Q9XVR6
RNASeq_FPKM (74)
Associated_featureWBsf011521
Methodcurated