WormBase Tree Display for CDS: C13B4.2
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C13B4.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_II | |||
Structure | Source_exons | 1 | 212 | |||
259 | 571 | |||||
947 | 1606 | |||||
2562 | 2846 | |||||
DB_info | Database | KEGG | KEGG_id | 3.4.19.12 | ||
SwissProt | UniProtAcc | Q17361 | ||||
UniProt | UniProtAcc | Q17361 | ||||
AlphaFold | entry | Q17361 | ||||
UniProt_GCRP | UniProtAcc | Q17361 | ||||
NCBI_protein | GI_number | GI:3874273 | ||||
TREEFAM | TREEFAM_ID | TF314494 | ||||
Protein_id | CHROMOSOME_II | CAB03876 | 1 | |||
DB_remark | USP-14 protein; contains similarity to Pfam domain PF00443 (Ubiquitin carboxyl-terminal hydrolase); contains similarity to Interpro domains IPR001394 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase), IPR029071 (Ubiquitin-like domain superfamily), IPR000626 (Ubiquitin-like domain), IPR044635 (Ubiquitin carboxyl-terminal hydrolase 14-like), IPR038765 (Papain-like cysteine peptidase superfamily) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00006856 | ||||
Corresponding_transcript | C13B4.2.1 | |||||
Corresponding_protein | CE15615 | |||||
Corresponding_PCR_product | cenix:200-d2 | |||||
mv_AAA74956 | ||||||
sjj2_C13B4.2.1 | ||||||
sjj_C13B4.2 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (85) | ||||||
RNAi_result | WBRNAi00002333 | |||||
WBRNAi00040414 | ||||||
WBRNAi00027633 | ||||||
WBRNAi00007535 | ||||||
Microarray_results (17) | ||||||
Brief_identification | Ubiquitin carboxyl-terminal hydrolase 14 | Accession_evidence | UniProt | SP:Q17361 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf000242 | |||||
Method | curated |