WormBase Tree Display for CDS: C06A8.6
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C06A8.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C06A8 | |||
Structure | Source_exons | 1 | 87 | |||
134 | 652 | |||||
702 | 884 | |||||
941 | 1099 | |||||
1150 | 1251 | |||||
DB_info | Database (6) | |||||
Protein_id | CHROMOSOME_II | CCD61464 | 1 | |||
DB_remark | contains similarity to Pfam domain PF12799 (Leucine Rich repeats (2 copies)); contains similarity to Interpro domains IPR025875 (Leucine rich repeat 4), IPR003591 (Leucine-rich repeat, typical subtype), IPR003603 (U2A'/phosphoprotein 32 family A, C-terminal), IPR032675 (Leucine-rich repeat domain superfamily), IPR050576 (Ciliary and flagellar integrity-associated protein) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00015516 | ||||
Corresponding_transcript | C06A8.6.1 | |||||
Corresponding_protein | CE02457 | |||||
Corresponding_PCR_product | cenix:203-f7 | |||||
mv_C06A8.6 | ||||||
sjj_C06A8.6 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (21) | ||||||
RNAi_result | WBRNAi00028547 | |||||
WBRNAi00010268 | ||||||
WBRNAi00039841 | ||||||
Microarray_results (18) | ||||||
Brief_identification | U2A'/phosphoprotein 32 family A C-terminal domain-containing protein | Accession_evidence | UniProt | TR:Q17692 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |