WormBase Tree Display for CDS: Bm6246
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Bm6246 | Evidence | Curator_confirmed | WBPerson4025 | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | ||
Structure | Source_exons | 1 | 186 | ||
371 | 467 | ||||
540 | 719 | ||||
967 | 1182 | ||||
1467 | 1615 | ||||
4626 | 4751 | ||||
6180 | 6413 | ||||
DB_info | Database | TrEMBL | UniProtAcc | A0A0H5SBI3 | |
UniProt | UniProtAcc | A0A0H5SBI3 | |||
AlphaFold | entry | A0A0H5SBI3 | |||
UniProt_GCRP | UniProtAcc | A0A0H5SBI3 | |||
Protein_id | Bm_v4_ChrX_scaffold_001 | CRZ25917 | 1 | ||
DB_remark | contains similarity to Pfam domain PF00320 (GATA zinc finger); contains similarity to Interpro domains IPR039355 (Transcription factor GATA), IPR000679 (Zinc finger, GATA-type), IPR013088 (Zinc finger, NHR/GATA-type) | ||||
Origin | From_laboratory | HX | |||
Species | Brugia malayi | ||||
Properties | Coding | CDS | |||
CDS_predicted_by | RATT | ||||
Prediction_status | Confirmed | ||||
Visible | Gene | WBGene00226507 | |||
Corresponding_transcript | Bm6246.1 | ||||
Corresponding_protein | BM29907 | ||||
Matching_cDNA | brugia_GG146|c8_g1_i1 | Inferred_automatically | transcript_builder.pl | ||
IsoSeq_brugia_PB_5774_1 | Inferred_automatically | transcript_builder.pl | |||
RNASeq_FPKM (10) | |||||
Remark | [131112 pad] Renamed from Bm6246z as this is a single Isoform locus. | Curator_confirmed | WBPerson1983 | ||
Associated_feature | WBsf915922 | ||||
Method | curated |