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WormBase Tree Display for CDS: Bm4999b

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Name Class

Bm4999bEvidenceCurator_confirmedWBPerson4055
SMapS_parentSequenceBm_v4_Chr1_scaffold_001
StructureSource_exons (106)
DB_infoDatabaseTrEMBLUniProtAccA0A158Q013
UniProtUniProtAccA0A158Q013
AlphaFoldentryA0A158Q013
UniProt_GCRPUniProtAccA0A158Q013
Protein_idBm_v4_Chr1_scaffold_001CDP999971
DB_remarkBMA-UNC-68 protein; contains similarity to Pfam domains PF00520 (Ion transport protein), PF00622 (SPRY domain), PF01365 (RIH domain), PF02026 (RyR domain), PF02815 (MIR domain), PF06459 (Ryanodine Receptor TM 4-6), PF08454 (RyR and IP3R Homology associated), PF08709 (Inositol 1,4,5-trisphosphate/ryanodine receptor), PF13499 (EF-hand domain pair); contains similarity to Interpro domains IPR014821 (Inositol 1,4,5-trisphosphate/ryanodine receptor), IPR011992 (EF-hand domain pair), IPR002048 (EF-hand domain), IPR013320 (Concanavalin A-like lectin/glucanase domain superfamily), IPR035910 (RyR/IP3 receptor binding core, RIH domain superfamily), IPR036300 (Mir domain superfamily), IPR009460 (Ryanodine Receptor TM 4-6), IPR005821 (Ion transport domain), IPR003032 (Ryanodine receptor Ryr), IPR013662 (RyR/IP3R Homology associated domain), IPR000699 (RIH domain), IPR043136 (B30.2/SPRY domain superfamily), IPR003877 (SPRY domain), IPR013333 (Ryanodine receptor), IPR016093 (MIR motif)
OriginFrom_laboratoryHX
SpeciesBrugia malayi
PropertiesCodingCDS
CDS_predicted_byRATT
Prediction_statusPartially_confirmed
IsoformInferred_automaticallyxace
VisibleGeneWBGene00225260
Corresponding_transcriptBm4999b.1
Corresponding_proteinBM23136
RNASeq_FPKMWBls:000007810.0846From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
23.189From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
26.6313From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
4.91544From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
5.08126From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
7.21445From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
8.20752From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
WBls:00000800.318471From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
0.953983From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
1.09342From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
1.82639From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (23)
WBls:000008215.382From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
15.6302From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
17.0532From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
9.80518From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
9.96008From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
WBls:0000083 (80)
WBls:00000924.63313From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
4.81819From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
WBls:00000944.00821From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
5.60755From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:00000970.23926From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
1.38459From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
16.0342From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
2.89368From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
2.97236From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
3.39212From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
WBls:00006624.42311From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
6.29226From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:00006637.30188From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Methodcurated