WormBase Tree Display for CDS: B0454.6
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B0454.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | B0454 | |||
Structure | Source_exons | 1 | 260 | |||
530 | 639 | |||||
688 | 911 | |||||
1274 | 1460 | |||||
1511 | 1617 | |||||
1866 | 2141 | |||||
2198 | 2557 | |||||
2838 | 2946 | |||||
3001 | 3125 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O17167 | ||
UniProt | UniProtAcc | O17167 | ||||
AlphaFold | entry | O17167 | ||||
UniProt_GCRP | UniProtAcc | O17167 | ||||
NCBI_protein | GI_number | GI:351018065 | ||||
Protein_id | CHROMOSOME_II | CCD61972 | 1 | |||
DB_remark | contains similarity to Pfam domains PF13520 (Amino acid permease), PF13906 (C-terminus of AA_permease); contains similarity to Interpro domains IPR029485 (Cationic amino acid transporter, C-terminal), IPR002293 (Amino acid/polyamine transporter I) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00015197 | ||||
Corresponding_transcript | B0454.6.1 | |||||
Corresponding_protein | CE07756 | |||||
Corresponding_PCR_product | cenix:203-d7 | |||||
mv_B0454.6 | ||||||
sjj_B0454.6 | ||||||
Corresponding_oligo_set (19) | ||||||
Matching_cDNA (30) | ||||||
RNAi_result | WBRNAi00009785 | |||||
WBRNAi00039072 | ||||||
Microarray_results (19) | ||||||
Brief_identification | Cationic amino acid transporter C-terminal domain-containing protein | Accession_evidence | UniProt | TR:O17167 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf015003 | |||||
Method | curated |