WormBase Tree Display for CDS: T23H4.1a
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| T23H4.1a | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T23H4 | |||
| Structure | Source_exons (11) | |||||
| DB_info | Database | TrEMBL | UniProtAcc | P91827 | ||
| UniProt | UniProtAcc | P91827 | ||||
| AlphaFold | entry | P91827 | ||||
| UniProt_GCRP | UniProtAcc | P91827 | ||||
| NCBI_protein | GI_number | GI:7160733 | ||||
| Protein_id | CHROMOSOME_I | CAB05813 | 2 | |||
| DB_remark | INX-20 protein; contains similarity to Pfam domain PF00876 (Innexin); contains similarity to Interpro domain IPR000990 (Innexin) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Isoform | From_analysis | jigsaw | ||||
| TWINSCAN | ||||||
| Visible | Gene | WBGene00002142 | ||||
| Corresponding_transcript | T23H4.1a.1 | |||||
| Corresponding_protein | CE25125 | |||||
| Corresponding_PCR_product | cenix:89-a3 | |||||
| mv_T23H4.1 | ||||||
| sjj_T23H4.1 | ||||||
| Corresponding_oligo_set (19) | ||||||
| Matching_cDNA | L4_Nanopore_Roach_44897 | Inferred_automatically | transcript_builder.pl | |||
| L4_Nanopore_Roach_4255 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_49150 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG6162|c9_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG6162|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_114243 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00070743 | |||||
| WBRNAi00004296 | ||||||
| WBRNAi00053991 | ||||||
| WBRNAi00070742 | ||||||
| Microarray_results (22) | ||||||
| Brief_identification | Innexin | Accession_evidence | UniProt | TR:P91827 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 01 Nov 2010 00:00:00 | WBPerson1983 | ||||
| Remark | Annotated using Pfam | |||||
| [000126 dl] Prediction modified based on halfwise analysis | Curator_confirmed | WBPerson1846 | ||||
| Method | curated |
