WormBase Tree Display for CDS: T10B10.8
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| T10B10.8 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_X | |||
| Structure | Source_exons | 1 | 127 | |||
| 358 | 524 | |||||
| 2525 | 2701 | |||||
| 2751 | 3067 | |||||
| 3126 | 3225 | |||||
| 3277 | 3444 | |||||
| 4577 | 4870 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | G5ECZ5 | ||
| UniProt | UniProtAcc | G5ECZ5 | ||||
| AlphaFold | entry | G5ECZ5 | ||||
| UniProt_GCRP | UniProtAcc | G5ECZ5 | ||||
| NCBI_protein | GI_number | GI:152003237 | ||||
| TREEFAM | TREEFAM_ID | TF321704 | ||||
| Protein_id | CHROMOSOME_X | CAA96680 | 3 | |||
| DB_remark | contains similarity to Interpro domains IPR050587 (GNT1/Glycosyltransferase 8), IPR029044 (Nucleotide-diphospho-sugar transferases) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00011684 | ||||
| Corresponding_transcript | T10B10.8.1 | |||||
| Corresponding_protein | CE41337 | |||||
| Corresponding_PCR_product | cenix:103-d7 | |||||
| mv_T10B10.8 | ||||||
| sjj_T10B10.8 | ||||||
| smd_T10B10.8 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA (24) | ||||||
| RNAi_result | WBRNAi00052992 | |||||
| WBRNAi00018522 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | Nucleotide-diphospho-sugar transferase | Accession_evidence | UniProt | TR:G5ECZ5 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 03 Jul 2007 00:00:00 | WBPerson1983 | ||||
| Remark | [010726 kj] Changed 5' end to avoid CeRep overlap. Changed 3' end according to gaze prediction to use better splice sites. | |||||
| [070703 pad] Gene prediction extended 5' and 3' based on remanei and briggsae protein homology. | Curator_confirmed | WBPerson1983 | ||||
| Associated_feature | WBsf021598 | |||||
| Method | curated |
