WormBase Tree Display for CDS: F56B6.2c
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| F56B6.2c | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F56B6 | |||
| Structure | Source_exons | 1 | 20 | |||
| 71 | 260 | |||||
| 332 | 421 | |||||
| 2563 | 2773 | |||||
| 5049 | 5176 | |||||
| 5316 | 5428 | |||||
| 8942 | 9075 | |||||
| 9134 | 9303 | |||||
| 9382 | 9506 | |||||
| 9569 | 9662 | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q8WQC0 | ||
| UniProtIsoformAcc | Q8WQC0-2 | |||||
| UniProt | UniProtAcc | Q8WQC0 | ||||
| AlphaFold | entry | Q8WQC0 | ||||
| UniProt_GCRP | UniProtAcc | Q8WQC0 | ||||
| NCBI_protein | GI_number | GI:351050171 | ||||
| Protein_id | CHROMOSOME_X | CCD64315 | 1 | |||
| DB_remark | RGS-7 protein; contains similarity to Pfam domain PF00615 (Regulator of G protein signaling domain); contains similarity to Interpro domains IPR036305 (RGS domain superfamily), IPR044926 (RGS, subdomain 2), IPR016137 (RGS domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | AU204454 | |||
| Feature_evidence | WBsf011570 | |||||
| Visible | Gene | WBGene00004350 | ||||
| Corresponding_transcript | F56B6.2c.1 | |||||
| Corresponding_protein | CE29404 | |||||
| Corresponding_PCR_product | cenix:31-f10 | |||||
| cenix:96-d3 | ||||||
| mv_F56B6.2 | ||||||
| mv_F56B6.3 | ||||||
| sjj_F56B6.2 | ||||||
| sjj_F56B6.3 | ||||||
| Corresponding_oligo_set (22) | ||||||
| Matching_cDNA | male_Nanopore_Roach_153175 | |||||
| young_adult_Nanopore_Roach_55134 | ||||||
| young_adult_Nanopore_Roach_121728 | ||||||
| male_Nanopore_Roach_15927 | ||||||
| L2_Nanopore_Roach_48052 | ||||||
| L4_Nanopore_Roach_63071 | ||||||
| L2_Nanopore_Roach_24345 | ||||||
| L2_Nanopore_Roach_40187 | ||||||
| RNAi_result | WBRNAi00048645 | |||||
| WBRNAi00048644 | ||||||
| WBRNAi00032932 | ||||||
| WBRNAi00015785 | ||||||
| Microarray_results (31) | ||||||
| Brief_identification | Regulator of G-protein signaling rgs-7 | Accession_evidence | UniProt | SP:Q8WQC0 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 22 Jan 2008 00:00:00 | WBPerson1867 | ||||
| Remark | SL1 trans-spliced; see yk1013g03.5 | |||||
| [20040406 tb] was previously called F56B6.2b, but was changed based on outside request and per Dan Lawson's suggestion. | Curator_confirmed | WBPerson1849 | ||||
| Method | curated |
