WormBase Tree Display for CDS: F08G12.10
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F08G12.10 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F08G12 | |||
Structure | Source_exons | 1 | 528 | |||
577 | 981 | |||||
1029 | 1178 | |||||
1371 | 1547 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q9U3K5 | ||
UniProt | UniProtAcc | Q9U3K5 | ||||
AlphaFold | entry | Q9U3K5 | ||||
UniProt_GCRP | UniProtAcc | Q9U3K5 | ||||
NCBI_protein | GI_number | GI:13548338 | ||||
Protein_id | CHROMOSOME_X | CAB54206 | 2 | |||
DB_remark | INX-2 protein; contains similarity to Pfam domain PF00876 (Innexin); contains similarity to Interpro domain IPR000990 (Innexin) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00002124 | ||||
Corresponding_transcript | F08G12.10.1 | |||||
Corresponding_protein | CE26709 | |||||
Corresponding_PCR_product | cenix:55-a7 | |||||
mv_G_YK5097 | ||||||
sjj_F08G12.2 | ||||||
Corresponding_oligo_set (11) | ||||||
Matching_cDNA (33) | ||||||
RNAi_result | WBRNAi00061779 | |||||
WBRNAi00098191 | ||||||
WBRNAi00012917 | ||||||
WBRNAi00033468 | ||||||
WBRNAi00044036 | ||||||
Microarray_results (13) | ||||||
Brief_identification | Innexin-2 | Accession_evidence | UniProt | SP:Q9U3K5 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 19 Jan 2001 00:00:00 | WBPerson1846 | ||||
Remark | [990809 ms2] : built based on EST data, I think this sequence corresponds to the sequence called F08G12.9 by sjj, after splitting F08G12.2 | |||||
[tsl] SL1 trans-spliced | ||||||
[991122 dl] : Corrections: Altered sjj tag to point to this prediction | Curator_confirmed | WBPerson1846 | ||||
[010119 dl] : Modified prediction based on WTP:XL914 (AF304127) | Curator_confirmed | WBPerson1846 | ||||
Method | curated |