WormBase Tree Display for CDS: C54G4.6
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C54G4.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C54G4 | |||
Structure | Source_exons | 1 | 66 | |||
114 | 248 | |||||
468 | 571 | |||||
615 | 767 | |||||
1038 | 1173 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q18851 | ||
UniProt | UniProtAcc | Q18851 | ||||
AlphaFold | entry | Q18851 | ||||
UniProt_GCRP | UniProtAcc | Q18851 | ||||
NCBI_protein | GI_number | GI:166156981 | ||||
TREEFAM | TREEFAM_ID | TF342992 | ||||
Protein_id | CHROMOSOME_I | CAA99818 | 2 | |||
DB_remark | DOD-18 protein; contains similarity to Pfam domain PF02545 (Maf-like protein); contains similarity to Interpro domains IPR029001 (Inosine triphosphate pyrophosphatase-like), IPR003697 (Nucleoside triphosphate pyrophosphatase Maf-like protein) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00008316 | ||||
Corresponding_transcript | C54G4.6.1 | |||||
Corresponding_protein | CE42082 | |||||
Corresponding_PCR_product | cenix:125-h9 | |||||
mv_C54G4.6 | ||||||
mv_C54G4.7 | ||||||
sjj_C54G4.6 | ||||||
sjj_C54G4.7 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (36) | ||||||
RNAi_result | WBRNAi00063208 | |||||
WBRNAi00063207 | ||||||
WBRNAi00003231 | ||||||
WBRNAi00043181 | ||||||
WBRNAi00116526 | ||||||
WBRNAi00063209 | ||||||
Microarray_results (19) | ||||||
Brief_identification | Nucleotide PPase | Accession_evidence | UniProt | TR:Q18851 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 17 Jan 2008 00:00:00 | WBPerson1983 | ||||
Remark | [080117 pad] Gene prediction extended 5' based on remanei and briggsae protein homology. | Protein_id_evidence | BP:CBG08210 | |||
RP:RP20103 | ||||||
Curator_confirmed | WBPerson1983 | |||||
Associated_feature | WBsf021225 | |||||
Method | curated |