WormBase Tree Display for CDS: C13A2.4
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| C13A2.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C13A2 | |||
| Structure | Source_exons | 1 | 222 | |||
| 269 | 388 | |||||
| 430 | 501 | |||||
| 554 | 695 | |||||
| 738 | 1120 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O16874 | ||
| UniProt | UniProtAcc | O16874 | ||||
| AlphaFold | entry | O16874 | ||||
| UniProt_GCRP | UniProtAcc | O16874 | ||||
| NCBI_protein | GI_number | GI:351021093 | ||||
| TREEFAM | TREEFAM_ID | TF316021 | ||||
| Protein_id | CHROMOSOME_V | CCD63105 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF05050 (Methyltransferase FkbM domain); contains similarity to Interpro domain IPR006342 (Methyltransferase FkbM) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00015721 | ||||
| Corresponding_transcript | C13A2.4.1 | |||||
| Corresponding_protein | CE41981 | |||||
| Corresponding_PCR_product | cenix:93-e1 | |||||
| mv_C13A2.4 | ||||||
| sjj_C13A2.4 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA | L3_Nanopore_Roach_2507 | |||||
| L3_Nanopore_Roach_77895 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_280651 | Inferred_automatically | transcript_builder.pl | ||||
| FM251360 | Inferred_automatically | transcript_builder.pl | ||||
| RST5_520208 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00040408 | |||||
| WBRNAi00010665 | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | Methyltransferase FkbM domain-containing protein | Accession_evidence | UniProt | TR:O16874 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 06 Dec 2007 00:00:00 | WBPerson1849 | ||||
| Remark | [20071206 tb] modified 5' exon based on RST5_520208. | Curator_confirmed | WBPerson1849 | |||
| Associated_feature | WBsf022881 | |||||
| Method | curated |
