WormBase Tree Display for CDS: PPA35750
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PPA35750 | SMap | S_parent | Sequence | PPA_ChrV | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 76 | |||
896 | 980 | |||||
1199 | 1288 | |||||
1608 | 1696 | |||||
2232 | 2305 | |||||
2427 | 2562 | |||||
2667 | 2809 | |||||
2848 | 2929 | |||||
2973 | 3097 | |||||
3220 | 3351 | |||||
3429 | 3523 | |||||
3579 | 3663 | |||||
3724 | 3858 | |||||
3936 | 4040 | |||||
4221 | 4304 | |||||
4347 | 4349 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S13-28.9 | ||
DB_remark | contains similarity to Pfam domain PF00876 (Innexin); contains similarity to Interpro domain IPR000990 (Innexin) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00274119 | ||||
Corresponding_transcript | PPA35750.1 | |||||
Corresponding_protein | PP60192 | |||||
Corresponding_oligo_set | GPL14372_Probes_56676 | |||||
GPL14372_Probes_56678 | ||||||
GPL14372_Probes_56679 | ||||||
GPL14372_Probes_56680 | ||||||
Microarray_results | GPL14372_Probes_56676 | |||||
GPL14372_Probes_56678 | ||||||
GPL14372_Probes_56679 | ||||||
GPL14372_Probes_56680 | ||||||
RNASeq_FPKM | WBls:0000032 | 4.8334 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 5.70848 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |