WormBase Tree Display for CDS: D2023.6
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| D2023.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | D2023 | |||
| Structure | Source_exons | 1 | 42 | |||
| 94 | 204 | |||||
| 257 | 406 | |||||
| 455 | 1255 | |||||
| 1303 | 1584 | |||||
| 1695 | 1847 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O17735 | ||
| UniProt | UniProtAcc | O17735 | ||||
| AlphaFold | entry | O17735 | ||||
| UniProt_GCRP | UniProtAcc | O17735 | ||||
| NCBI_protein | GI_number | GI:3875410 | ||||
| TREEFAM | TREEFAM_ID | TF314889 | ||||
| Protein_id | CHROMOSOME_V | CAB02876 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF03109 (ABC1 atypical kinase-like domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR051130 (Mitochondrial structure and function regulator), IPR004147 (ABC1 atypical kinase-like domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00008410 | ||||
| Corresponding_transcript | D2023.6.1 | |||||
| Corresponding_protein | CE09076 | |||||
| Corresponding_PCR_product | cenix:38-b8 | |||||
| mv_D2023.6 | ||||||
| sjj_D2023.6 | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA (57) | ||||||
| RNAi_result | WBRNAi00061771 | |||||
| WBRNAi00012574 | ||||||
| WBRNAi00030390 | ||||||
| WBRNAi00043456 | ||||||
| WBRNAi00000671 | ||||||
| Microarray_results | SMD_D2023.6 | |||||
| 190495_at | ||||||
| A_12_P119980 | ||||||
| Aff_D2023.6 | ||||||
| GPL13394_WBGene00008410 | ||||||
| GPL13914_D2023.6 | ||||||
| GPL14144_D2023.6_1034-1093_0.928_8_B | ||||||
| GPL14144_D2023.6_1238-1297_0.940_4_A | ||||||
| GPL14144_D2023.6_941-1000_0.912_16_C | ||||||
| GPL3518_CE09076 | ||||||
| GPL8304_CE_WBGene00008410_A | ||||||
| GPL8304_CE_WBGene00008410_C | ||||||
| GPL8673_D2023_6P00328 | ||||||
| GPL8673_D2023_6P01116 | ||||||
| GPL8673_D2023_6P01400 | ||||||
| GPL9450_D2023.6 | ||||||
| cea2.p.111915 | ||||||
| Brief_identification | ABC1 atypical kinase-like domain-containing protein | Accession_evidence | UniProt | TR:O17735 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
