WormBase Tree Display for CDS: C34F11.6
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| C34F11.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C34F11 | |||
| Structure | Source_exons | 1 | 384 | |||
| DB_info | Database | SwissProt | UniProtAcc | Q18461 | ||
| UniProt | UniProtAcc | Q18461 | ||||
| AlphaFold | entry | Q18461 | ||||
| UniProt_GCRP | UniProtAcc | Q18461 | ||||
| NCBI_protein | GI_number | GI:351058381 | ||||
| Protein_id | CHROMOSOME_II | CCD65826 | 1 | |||
| DB_remark | MSP-49 protein; contains similarity to Pfam domain PF00635 (MSP (Major sperm protein) domain); contains similarity to Interpro domains IPR008962 (PapD-like superfamily), IPR013783 (Immunoglobulin-like fold), IPR000535 (Major sperm protein (MSP) domain), IPR051155 (Nematode Major Sperm) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00003442 | ||||
| Corresponding_transcript | C34F11.6.1 | |||||
| Corresponding_protein | CE04166 | |||||
| Corresponding_PCR_product | cenix:203-f6 | |||||
| mv_C34F11.6 | ||||||
| sjj_C34F11.6 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (46) | ||||||
| RNAi_result | WBRNAi00029540 | |||||
| WBRNAi00092860 | ||||||
| WBRNAi00041913 | ||||||
| WBRNAi00011619 | ||||||
| WBRNAi00059507 | ||||||
| Microarray_results | SMD_C34F11.6 | |||||
| 172885_x_at | ||||||
| 172896_x_at | ||||||
| A_12_P120275 | ||||||
| Aff_C34F11.6 | ||||||
| GPL14144_C34F11.6_48-107_0.881_1_A | ||||||
| GPL19516_CGZ0007553 | ||||||
| GPL19516_CGZ0007555 | ||||||
| GPL21109_C34F11.4 | ||||||
| GPL21109_C34F11.6 | ||||||
| GPL3518_CE04166 | ||||||
| GPL8304_CE_WBGene00003442_A | ||||||
| GPL8673_C34F11_6P00168 | ||||||
| GPL8673_C34F11_6P00214 | ||||||
| GPL9450_C34F11.4 | ||||||
| GPL9450_C34F11.6 | ||||||
| cea2.d.15447 | ||||||
| cea2.d.15452 | ||||||
| Brief_identification | Major sperm protein 49 | Accession_evidence | UniProt | SP:Q18461 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
