WormBase Tree Display for CDS: C04H5.1
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| C04H5.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C04H5 | |||
| Structure | Source_exons | 1 | 144 | |||
| 583 | 816 | |||||
| DB_info | Database | SwissProt | UniProtAcc | O45241 | ||
| UniProt | UniProtAcc | O45241 | ||||
| AlphaFold | entry | O45241 | ||||
| UniProt_GCRP | UniProtAcc | O45241 | ||||
| NCBI_protein | GI_number | GI:3873940 | ||||
| TREEFAM | TREEFAM_ID | TF313256 | ||||
| Protein_id | CHROMOSOME_II | CAB03840 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF03966 (Trm112p-like protein); contains similarity to Interpro domains IPR039127 (Multifunctional methyltransferase subunit Trm112), IPR005651 (Trm112-like) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00007312 | ||||
| Corresponding_transcript | C04H5.1.1 | |||||
| Corresponding_protein | CE15587 | |||||
| Corresponding_PCR_product | cenix:230-e2 | |||||
| mv_C04H5.1 | ||||||
| sjj_C04H5.1 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (18) | ||||||
| RNAi_result | WBRNAi00028466 | |||||
| WBRNAi00010160 | ||||||
| WBRNAi00039674 | ||||||
| WBRNAi00061725 | ||||||
| WBRNAi00076080 | ||||||
| Microarray_results | SMD_C04H5.1 | |||||
| 179529_at | ||||||
| A_12_P111297 | ||||||
| Aff_C04H5.1 | ||||||
| GPL13394_WBGene00007312 | ||||||
| GPL13914_C04H5.1 | ||||||
| GPL14144_C04H5.1_207-266_0.909_9_C | ||||||
| GPL14144_C04H5.1_45-104_0.940_2_A | ||||||
| GPL14144_C04H5.1_78-137_0.947_1_B | ||||||
| GPL19516_CGZ0002431 | ||||||
| GPL21109_C04H5.1 | ||||||
| GPL3518_CE15587 | ||||||
| GPL8304_CE_WBGene00007312_A | ||||||
| GPL8304_CE_WBGene00007312_B | ||||||
| GPL8673_C04H5_1P00102 | ||||||
| GPL8673_C04H5_1P00111 | ||||||
| GPL8673_C04H5_1P00120 | ||||||
| GPL9450_C04H5.1 | ||||||
| cea2.i.08638 | ||||||
| Brief_identification | Multifunctional methyltransferase subunit TRM112-like protein | Accession_evidence | UniProt | SP:O45241 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf125466 | |||||
| Method | curated |
