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WormBase Tree Display for CDS: T28A8.4

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Name Class

T28A8.4EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceT28A8
StructureSource_exons1143
186299
353625
671784
832978
10361372
14201635
16841749
DB_infoDatabaseTrEMBLUniProtAccQ9XU05
UniProtUniProtAccQ9XU05
AlphaFoldentryQ9XU05
UniProt_GCRPUniProtAccQ9XU05
NCBI_proteinGI_numberGI:3880338
TREEFAMTREEFAM_IDTF322256
Protein_idCHROMOSOME_IIICAB072881
DB_remarkcontains similarity to Pfam domain PF04435 (Domain of unknown function (DUF545)); contains similarity to Interpro domains IPR006570 (SPK domain), IPR053315 (Peptidase C14A)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00012110
Corresponding_transcriptT28A8.4.1
Corresponding_proteinCE18975
Corresponding_PCR_productTH:321E7
cenix:321-e7
mv_T28A8.4
sjj_T28A8.4
Corresponding_oligo_set179146_at
A_12_P106072
Aff_T28A8.4
GPL14144_T28A8.4_1297-1356_0.939_3_A
GPL19516_CGZ0037372
GPL21109_T28A8.4
GPL3518_CE18975
GPL8304_CE_WBGene00012110_A
GPL8304_CE_WBGene00012110_C
GPL8673_T28A8_4P00038
GPL8673_T28A8_4P00313
GPL8673_T28A8_4P00886
GPL9450_T28A8.4
cea2.3.25234
cea2.p.75059
Matching_cDNA (30)
RNAi_resultWBRNAi00006075
WBRNAi00019374
WBRNAi00036065
WBRNAi00054373
Microarray_results (16)
Brief_identificationSPK domain-containing proteinAccession_evidenceUniProtTR:Q9XU05
RNASeq_FPKM (74)
Associated_featureWBsf020554
Methodcurated