WormBase Schema for Model: Pseudogene
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?Pseudogene | Evidence | #Evidence | ||||||
---|---|---|---|---|---|---|---|---|
SMap | S_parent | UNIQUE | Sequence | UNIQUE | ?Sequence | XREF | Pseudogene | |
Transposon | UNIQUE | ?Transposon | XREF | Pseudogene_child | ||||
Structure | Source_exons | Int | UNIQUE | Int | ||||
DB_info | DB_remark | ?Text | #Evidence | |||||
Database | ?Database | ?Database_field | UNIQUE | ?Text | ||||
Origin | From_laboratory | UNIQUE | ?Laboratory | |||||
Species | UNIQUE | ?Species | ||||||
Type | UNIQUE | Coding_pseudogene | #Evidence | |||||
RNA_pseudogene | #Evidence | |||||||
Transposon_pseudogene | #Evidence | |||||||
Attributes | Transcribed | #Evidence | ||||||
Fragment | #Evidence | |||||||
SubType | UNIQUE | processed_pseudogene | #Evidence | |||||
unprocessed_pseudogene | #Evidence | |||||||
Truncated_5 | #Evidence | |||||||
Truncated_3 | #Evidence | |||||||
Frameshifts | UNIQUE | Int | ||||||
Properties | Isoform | #Evidence | ||||||
Visible | Gene | UNIQUE | ?Gene | XREF | Corresponding_pseudogene | |||
Gene_history | UNIQUE | ?Gene | XREF | Corresponding_pseudogene_history | ||||
Matching_cDNA | ?Sequence | XREF | Matching_pseudogene | #Evidence | ||||
Brief_identification | UNIQUE | ?Text | #Evidence | |||||
Corresponding_PCR_product | ?PCR_product | XREF | Overlaps_pseudogene | |||||
Corresponding_oligo_set | ?Oligo_set | XREF | Overlaps_pseudogene | |||||
Corresponding_transposon | UNIQUE | ?Transposon | XREF | Corresponding_pseudogene | ||||
RNAi_result | ?RNAi | XREF | Pseudogene | |||||
Variation | ?Variation | XREF | Pseudogene | |||||
Provisional_description | ?Text | #Evidence | ||||||
Detailed_description | ?Text | #Evidence | ||||||
Concise_description | ?Text | #Evidence | ||||||
SAGE_tag | ?SAGE_tag | XREF | Pseudogene | #SAGE_mapping_info | ||||
Microarray_results | ?Microarray_results | XREF | Pseudogene | |||||
RNASeq_FPKM | ?Life_stage | Float | #Evidence | |||||
Last_reviewed | UNIQUE | DateType | UNIQUE | ?Person | ||||
Remark | ?Text | #Evidence | ||||||
Associated_feature | ?Feature | XREF | Associated_with_pseudogene | #Evidence | ||||
Confidential_remark | ?Text | |||||||
Method | UNIQUE | ?Method |