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Species » C. elegans(Genome assembly: WBcel235)

Transcript » C38C6.7a

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  • Comments on C38C6.7a (0)

  • Overview

    C38C6.7a (WormBase Transcript)

    Species:
    Caenorhabditis elegans
    Method:
    ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product
    Associated feature:
    WormBase ID:
    C38C6.7a
    View Sequence:
    Probabable Pol III transcribed mature RNA
    Mature product:
    Ce228
    Laboratory:
    (Sarah Dyer)
    Available From:
    Curatorial remarks
    [140516 pad] This Transcript may represent a mature or partially processed PolIII transcribed ncRNA.
    evidence

    [061103 pad] Gene predictions entered to represent miRNAs published by Zemann et al 2006.
    evidence

    [070605 pad] After consultation with miRBase, this prediction has been re-classified as a ncRNA. The authors of the paper critically haven't shown that a ~22nt species is made from this. A hairpin alone may not be enough evidence as hairpin structures can be found all over the genome.
    evidence

    non-protein coding RNA lfor-2
    Gene Transcript Transcript
    Length (nt)    		 Type Coding
    Sequence
    (CDS)    		 Coding
    Sequence
    Length (nt)    		 Protein Protein
    Length (aa)
    lfor-2
    • 302
    • 57
    • ncRNA
    • ncRNA
    		(no CDS)

  • Sequences

    Sequence:
    Strand:
    (-)
    Predicted Exon Structure:
    Exon # Start End Length
    115757
    Predicted Genes & Transcriptional Units: