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Species » C. elegans(Genome assembly: WBcel235)

CDS » ZK337.1b

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  • Comments on ZK337.1b (0)

  • Overview

    ZK337.1b (WormBase CDS)

    Species:
    Caenorhabditis elegans
    Method:
    curated: This corresponds to a Coding Sequence that has been manually curated and classified as a protein coding ORF.
    Partial CDS:
    WormBase ID:
    ZK337.1b
    View Sequence:
    Curatorial remarks
    Annotated using Pfam
    [030604 ar2] Added another exon to the 3' end as suggested by yk76f4.3. Also removed connection to yk100a11 as this was erroneous
    evidence

    TEP-1 protein; contains similarity to Pfam domains PF00207 (Alpha-2-macroglobulin family), PF01835 (MG2 domain), PF07677 (A-macroglobulin receptor binding domain), PF07678 (A-macroglobulin TED domain), PF07703 (Alpha-2-macroglobulin bait region domain), PF17791 (Macroglobulin domain MG3); contains similarity to Interpro domains IPR047565 (Alpha-macroglobulin-like, thiol-ester bond-forming region), IPR041555 (Macroglobulin domain MG3), IPR050473 (Alpha-2-macroglobulin/Complement system), IPR011625 (Alpha-2-macroglobulin, bait region domain), IPR001599 (Alpha-2-macroglobulin), IPR011626 (Alpha-macroglobulin-like, TED domain), IPR002890 (Macroglobulin domain), IPR036595 (Alpha-macroglobulin, receptor-binding domain superfamily), IPR013783 (Immunoglobulin-like fold), IPR009048 (Alpha-macroglobulin, receptor-binding), IPR008930 (Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid)
    Gene Transcript Transcript
    Length (nt)    		 Type Coding
    Sequence
    (CDS)    		 Coding
    Sequence
    Length (nt)    		 Protein Protein
    Length (aa)
    tep-1ZK337.1b.14708Coding transcript
    ZK337.1b
    details
    		4506TEP-1, isoform b1501

  • Sequences

    Sequence:
    Strand:
    ()
    Predicted Exon Structure:
    Predicted Genes & Transcriptional Units: