The animal's sinuous locomotion is a direct result of a cross activational/inhibitory network of motor neurons in the ventral nerve cord (VNC). This is network is composed of cholinergic (excitatory) inputs and GABAergic (inhibitory) inputs that originate from distinct classes and subclasses of motor neurons. The excitatory motor neurons are comprised of the A (for backward locomotion) and B(for forward locomotion). The inhibitory motor neurons are comprised of the D class motor neurons which are predicted to be required for both backward and forward locomotion. Both cholinergic and GABAergic classes can be further subdivided by innervation type and developmental origin. The GABAergic DD subclass is embryonic and innervates dorsal muscle in adult animals while the VD subclass is postembryonic and innervates ventral muscle. Both the DD and VD motor neurons express the transcription factor, UNC-30 which is necessary and sufficient for post mitotic differentiation GABAergic D class motor neurons. The VD motor neurons express a nuclear hormone receptor, UNC-55 which prevents the VD motor neurons from innervating the dorsal muscle and assuming a DD like fate through the suppression of various UNC-30 transcriptional targets. Interestingly, UNC-55 is not transcriptionally regulated by UNC-30. Thus in the DD and VD motor neurons which share very similar developmental mechanisms, how is the expression of UNC-55 regulated in the VNC?To address this question, the transcriptional activation of
unc-55 and the differentiation of the VD motor neurons was tested utilizing bioinformatics, mutant analyses of candidate regulators, promoter dissection, exon specific disruption utilizing CRISPR/Cas9 and GFP constructs. Several putative transcription factor binding sites (cis sites) corresponding to the MEIS domain transcription factor, UNC-62 were found on the
unc-55 promoter. Different mutant alleles of UNC-62 were found to repress, activate or have no effect on
punc-55::gfp expression. Interestingly, each mutant allele of UNC-62 disrupts alternatively spliced or transcribed exons. Dissection of the
unc-55 promoter identified multiple regions and putative cis sites that correlate with the UNC-62 mutant expression patterns. These data provide evidence that different isoforms of UNC-62 are required for activation and repression of
unc-55 transcription and subsequently VD motor neuron differentiation. Isoform specific transcriptional regulation of differentiating neurons is a relatively unexplored area of research and represents an interesting mechanism for differentiation in neuronal subtypes.