- WBPaper00062305:P.brevicompactum_downregulated
voom from limma v 3.42.2 was applied to estimate fold changes and BH-adjusted p-values.
Transcripts that showed significantly decreased expression after L1 stage N2 animals were grown on plates covered by mold Penicillium brevicompacum with E. coli OP50 for 48 hours at 20 centigrade.
- WBPaper00062305:P.brevicompactum_upregulated
voom from limma v 3.42.2 was applied to estimate fold changes and BH-adjusted p-values.
Transcripts that showed significantly increased expression after L1 stage N2 animals were grown on plates covered by mold Penicillium brevicompacum with E. coli OP50 for 48 hours at 20 centigrade.
- WBPaper00056090:E.faecalis_downregulated_N2
Cuffcompare and Cuffdiff
Transcripts that showed significantly decreased expression in N2 after animals were exposed to E. faecalis OG1RF for 16 hours comparing to exposure to E. Coli OP50.
- WBPaper00056090:E.faecalis_upregulated_N2
Cuffcompare and Cuffdiff
Transcripts that showed significantly increased expression in N2 after animals were exposed to E. faecalis OG1RF for 16 hours comparing to exposure to E. Coli OP50.
- [cgc6390]:Cluster_E
hierarchical clustering
Germline-enriched and sex-biased expression profile cluster E.
- WBPaper00061007:HB101_downregulated
DESeq2 fold change > 2, p-value < 0.01.
Transcripts that showed significantly decreased expression after fed by bacteria E. coli HB101 for 30 generations comparing to animals fed by E. coli OP50.
- WBPaper00061007:HB115_downregulated
DESeq2 fold change > 2, p-value < 0.01.
Transcripts that showed significantly decreased expression after fed by bacteria E. coli HB115 for 30 generations comparing to animals fed by E. coli OP50.
- WBPaper00061007:HB101_upregulated
DESeq2 fold change > 2, p-value < 0.01.
Transcripts that showed significantly increased expression after fed by bacteria E. coli HB101 for 30 generations comparing to animals fed by E. coli OP50.