WBPaper00062684:pathogen_downregulated_N2

DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2. Transcripts in N2 animals that showed significantly decreased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)

WBPaper00062684:pathogen_upregulated_CB4856

DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2. Transcripts in CB4856 animals that showed significantly increased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)

WBPaper00062684:pathogen_upregulated_N2

DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2. Transcripts in N2 animals that showed significantly increased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)

WBPaper00062684:pathogen_downregulated_CB4856

DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2. Transcripts in CB4856 animals that showed significantly decreased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)

WBPaper00061508:S.aureus_12h_upregulated

N.A. Proteins that showed significantly increased expression after 12 hours of exposure to S. aureus.

WBPaper00061508:S.aureus_12h_downregulated

N.A. Proteins that showed significantly decreased expression after 12 hours of exposure to S. aureus.

WBPaper00061508:S.aureus_24h_downregulated

N.A. Proteins that showed significantly decreased expression after 24 hours of exposure to S. aureus.

WBPaper00061508:S.aureus_36h_upregulated

N.A. Proteins that showed significantly increased expression after 36 hours of exposure to S. aureus.

WBPaper00041960:jun-1_fasting_upregulated

Statistical analysis was performed by two-way analysis of variance (ANOVA) with a Benjamini and Hochberg false discovery rate (BH-FDR-0.1) multiple testing corrections followed by Tukey post hoc tests using log-transformed data (GeneSpring GX). Genes upregulated more than 2-fold by fasting for 48 hours in N2 and in jun-1(gk557).

WBPaper00055049:S.gordonii_downregulated

Fold change > 2, FDR corrected p-value < 0.05. Transcripts that showed significantly decreased expression after L4 larva animals were exposed to wild type S. gordonii for 2-3 hours, comparing to animals exposed to S. gordonii delta-spxB.