WBPaper00064933:E.coli-binding_secret_protein

N.A. Secreted proteins that bind E. coli pellet.

WBPaper00056090:E.faecalis_downregulated_N2

Cuffcompare and Cuffdiff Transcripts that showed significantly decreased expression in N2 after animals were exposed to E. faecalis OG1RF for 16 hours comparing to exposure to E. Coli OP50.

WBPaper00056090:E.faecalis_upregulated_N2

Cuffcompare and Cuffdiff Transcripts that showed significantly increased expression in N2 after animals were exposed to E. faecalis OG1RF for 16 hours comparing to exposure to E. Coli OP50.

[cgc6390]:Cluster_E

hierarchical clustering Germline-enriched and sex-biased expression profile cluster E.

WBPaper00061007:HB101_downregulated

DESeq2 fold change > 2, p-value < 0.01. Transcripts that showed significantly decreased expression after fed by bacteria E. coli HB101 for 30 generations comparing to animals fed by E. coli OP50.

WBPaper00061007:HB115_downregulated

DESeq2 fold change > 2, p-value < 0.01. Transcripts that showed significantly decreased expression after fed by bacteria E. coli HB115 for 30 generations comparing to animals fed by E. coli OP50.

WBPaper00056391:HT115_downregulated

Differentially regulated genes were determined on the basis of fold change (> 2) and the value of a modified Wilcoxon rank test (> 1.5). Th eWilcoxon coefficient was determined for each probe set as the smallest expression value in the condition with higher average divided by the highest expression value in the condition with lower average. Transcripts with significantly decreased expression by feeding on E. coli HT115 vs. E. coli OP50. in young adult glp-4(bn2) worms, grown on E. coli HT115 since L1 stage. Fold changes shown are normalized to the genes expression levels in E. coliOP50.

WBPaper00056391:HT115_upregulated

Differentially regulated genes were determined on the basis of fold change (> 2) and the value of a modified Wilcoxon rank test (> 1.5). Th eWilcoxon coefficient was determined for each probe set as the smallest expression value in the condition with higher average divided by the highest expression value in the condition with lower average. Transcripts with significantly increased expression by feeding on E. coli HT115 vs. E. coli OP50. in young adult glp-4(bn2) worms, grown on E. coli HT115 since L1 stage. Fold changes shown are normalized to the genes expression levels in E. coliOP50.

WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)

Cuffcompare and Cuffdiff Transcripts that showed significantly increased expression in hpx-2(dg047) after animals were exposed to E. faecalis OG1RF for 16 hours comparing to exposure to E. Coli OP50.

WBPaper00061007:HB101_upregulated

DESeq2 fold change > 2, p-value < 0.01. Transcripts that showed significantly increased expression after fed by bacteria E. coli HB101 for 30 generations comparing to animals fed by E. coli OP50.