- WBPmat00000040
PHA-4 PFM, from early-activated pharyngeal (Ph-E) genes; probably higher-affinity, compared to PHA-4 Ph-L sites; weight matrix.
- WBPmat00000041
PHA-4 PFM, from later-activated pharyngeal (Ph-L) genes; probably lower-affinity, compared to PHA-4 Ph-E sites; weight matrix.
- WBPmat00000030
PHA-4 PFM, from later-activated pharyngeal (Ph-L) genes; probably lower-affinity, compared to PHA-4 Ph-E sites; frequency matrix.
- WBPmat00000029
PHA-4 PFM, from early-activated pharyngeal (Ph-E) genes; probably higher-affinity, compared to PHA-4 Ph-L sites; frequency matrix.
- WBPmat00005486
Motif A from rex sites, as defined in WBPaper00028816/pmid17122774.
- WBPmat00005484
Tandem motif associated with poly(A)+ site in ribosomal mRNA 3' UTRs.
- WBPmat00005527
Motif number 2-18 predicted by Mortazavi et al. (2010); previously found by Elemento and Tavazoie (2005) as a motif with 140th significance out of 375.
- WBPmat00000049
P1b, found in PHA-4-regulated pharyngeal genes; predicted to act as a weak, variable enhancer in pharyngeal cells after the pharynx primordium forms; weight matrix.
- WBPmat00000037
P1a, found in PHA-4-regulated pharyngeal genes; predicted to act as a weak, variable enhancer in pharyngeal cells after the pharynx primordium forms; frequency matrix.
- WBPmat00000048
P1a, found in PHA-4-regulated pharyngeal genes; predicted to act as a weak, variable enhancer in pharyngeal cells after the pharynx primordium forms; weight matrix.