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[
2008]
In this chapter, selected aspects of the early embryogenesis of five representatives from different branches of the phylogenetic tree are compared with C. elegans and the impact of the observed differences for evolutionary considerations are discussed. Following a brief reference to phylogeny, basic features of early embryogenesis of C. elegans will be summarised to aid in appreciating the data from other nematodes reported subsequently.
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[
1987]
One way to gain an understanding of any biological process is through the use of mutant analysis and selective breeding to generate stocks which have genetic alterations in that process. We have taken just this approach in the analysis of aging...
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[
1969]
In order to study properly the nutrition and culture of nematodes, it is desirable to establish the organisms in axenic culture. Only in this way can the metabolic abilities of the nematodes be separated from those of coexisting and interacting organisms. One may settle for a mono-axenic culture, but the best way to attain this is to obtain axenic nematodes and then add the second organism or tissue, for example, alfalfa callus tissue for plant parasitic nematodes (Krusberg, 1961). This chapter will devote itself, in the main, to recent work on the culture and nutrition of nematodes, free-living and parasitic, and will refer only in passing to work already thoroughly reviewed (Dougherty et al., 1959; Nicholas, et al., 1959; Dougherty, 1960).
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[
2012]
Genetic divergence appears to be high among nematodes, while morphological variation is low. To better understand how this fits together and to trace the evolution of development in this phylum we started a comprehensive comparative survey of embryogenesis comprising all branches of the phylogenetic tree. We find considerable differences, in particular between basal and more derived species. This review focuses on cellular pattern formation and cell fate assignment during early development. Our data indicate that evolution of nematodes went from indeterminate early cleavage without initial polarity to invariant cell lineages with establishment of polarity before first division. Different ways to establish this polarity and the variety of taxon-specific spatial arrangements of cells require modifications with respect to cell specification processes and the underlying molecular mechanisms. We conclude that the standard pattern as found in the model system C. elegans constitutes only one of the many ways to construct a nematode and discuss the adaptive value of the observed developmental variations.
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[
1960]
For the purpose of the present chapter the noun 'cultivation' is to be taken as the maintenance, in the laboratory, of a population of organisms belonging to a desired species through successive generations and subcultures over a prolonged period of time (weeks, months, or years). This is a deliberate restriction of the term. The noun 'culture' is most aptly used for a population within a circumscribed vessel or container (test-tube, Petri dish, U.S. Bureau of Plant Industry watch glass, etc.); it is also used in a looser, more general way (as "in culture") to cover conditions of substantial growth whether or not leading to cultivation in the strict sense
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[
Modern Cell Biology,
1994]
During the development of any multicellular organism, the behavior of any given cell can be influenced in two ways: by its ancestry, i.e., by the particular pattern of determinants it inherits (lineal programming); or by its environment, i.e., the signals it receives from other cells. In C. elegans, the relative importance of these two factors for the development of any given cell can be examined with an unusually high degree of precision. There are a number of reasons for this, but perhaps the most important is that the cell lineage, the particular pattern of cell divisions and differentiations that occur in development, is known, and is largely the same from animal to animal. Alterations in the lineage, therefore, can be understood in terms of altered developmental decisions of
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[
1988]
The development of a multicellular organism from a single-celled egg involves the coordinated control of many cells and tissues. How are cells specified to develop as one cell type rather than another, in one position rather than another, and at one time rather than another? What is the molecular basis of the spatial and temporal cues necessary to direct development of the organism? The information for this developmental feat is stored in the egg-either in its genome or in products of the maternal genome contributed to that cell. Developmental genetics provides a powerful way to investigate that information. The nematode, Caenorhabditis elegans, has proven to be an excellent model organism for analysis of the genes that control development...
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[
Methods Cell Biol,
1995]
One way to study cell function is to eliminate the cell and observe subsequent developmental or behavioral abnormalities in the animal. In Caenorhabditis elegans, this is usually accomplished by killing individual cells or groups of cells with a laser microbeam. Laser killing has been used to determine the functions of many mature cell types, including neurons involved in locomotion, feeding, mechanosensation, and chemosensation. These studies have been practical because only a few cell types appear to be absolutely required for viability. Laser ablation can also be sued to ask how cells interact during development. Signaling and inductive interactions between cells can be examined by removing one cell and observing the development of the remaining cells...
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[
Methods Mol Biol,
2011]
Quantitative proteomics aims to identify and quantify proteins in cells or organisms that have been obtained from different biological origin (e.g., "healthy vs. diseased"), that have received different treatments, or that have different genetic backgrounds. Protein expression levels can be quantified by labeling proteins with stable isotopes, followed by mass spectrometric analysis. Stable isotopes can be introduced in vitro by reacting proteins or peptides with isotope-coded reagents (e.g., iTRAQ, reductive methylation). A preferred way, however, is the metabolic incorporation of heavy isotopes into cells or organisms by providing the label, in the form of amino acids (such as in SILAC) or salts, in the growth media. The advantage of in vivo labeling is that it does not suffer from side reactions or incomplete labeling that might occur in chemical derivatization. In addition, metabolic labeling occurs at the earliest possible moment in the sample preparation process, thereby minimizing the error in quantitation. Labeling with the heavy stable isotope of nitrogen (i.e., (15)N) provides an efficient way for accurate protein quantitation. Where the application of SILAC is mostly restricted to cell culture, (15)N labeling can be used for micro-organisms as well as a number of higher (multicellular) organisms. The most prominent examples of the latter are Caenorhabditis elegans and Drosophila (fruit fly), two important model organisms for a range of regulatory processes underlying developmental biology. Here we describe in detail the labeling with (15)N atoms, with a particular focus on fruit flies and C. elegans. We also describe methods for the identification and quantitation of (15)N-labeled proteins by mass spectrometry and bioinformatic analysis.
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[
1975]
Studies in behaviour genetics have covered a wide field: motivation, development, sensory capacities, intelligence, learning, evolution, neuromorphology and neurochemistry have all been approached using genetic techniques, and there are probably others. Whilst it is at present impossible to construct any unities one must accept that many such studies have as their common aim one of the most fundamental problems in biology: how is behavioral potential encoded in genetic terms and expressed in the course of development? The relative enormity of this problem is often matched by its inaccessibilty. It cannot be claimed that there is any agreed view of the way forward and much of the work has frankly to be opportunistic-seizing on some favourable material or a useful new analytical technique to gain a limited objective. Consequently, behaviour genetics often presents a confusing picture of numerous disjointed studies, with