P granules in C. elegans are associated with RNA metabolism and function to maintain the integrity of germ cells. We previously published a genome-wide RNAi screen for aberrant P granules, where we found that depletion of the gene encoding CSR-1, as well as its cofactors DRH-3 and EGO-1, causes a very distinct large P-granule phenotype. CSR-1 is an Argonaute protein and a core component of P granules that acts to suppress the extent of sperm-gene expression in the hermaphrodite germline. Our aim was to identify additional genes that are essential for P-granule function and proper germ cell development.To address this, we performed an EMS mutagenesis in a PGL-1::GFP strain and used fluorescence microscopy to screen 4000 haploid genomes for large and misshaped P-granules. From this screen we isolated ten alleles that fall into six complementation groups. Two of these alleles,
sam15 and
sam18, contain mutations in the PAZ domain of
csr-1 itself, validating our approach. We have stained and quantified the expression of endogenous P-granule components in each of our mutants to show that their large P granules are independent of the PGL-1::GFP transgene. We next used a Hawaiian Variant Mapping strategy and the CloudMap pipeline to clone a number of these alleles, revealing known CSR-1 cofactors but also novel components required for P-granule assembly. CRISPR technology, together with RNAi and fosmid microinjections were used to validate whether identified mutations are linked to observed phenotypes. Here we report on a novel gene with early stop codons in
sam3 and
sam6 alleles that alters P-granule appearance and expression, but is not required for fertility. Single-molecule FISH shows that this gene is enriched and expressed through the adult germline. We are currently investigating how various alleles of the novel gene affect P-granule morphology and function. Our results broaden our understanding of the role of germ granules in the germline as well as the epigenetic mechanisms that regulate germ cell integrity.