Organs are composed of various tubes of differing cellular architectures. Seamless tubes are a type of unicellular tube that lack junctions and are found in the mammalian and zebrafish vasculature, Drosophila trachea, and C. elegans excretory system. Lumen formation in seamless tubes involves cell hollowing, whereby intracellular vesicles coalesce to create a luminal space. Recent studies in the C. elegans excretory canal have shown that coordinated vesicle fusion is also required for lumen expansion, however polarity cues that target vesicles to the apical surface of the lumen remain poorly understood. Our lab recently showed that PAR polarity proteins are present on the luminal surface of the excretory canal and co-localize with components of the exocyst, a complex required for targeting vesicles to discrete cell surface sites, and for lumen formation in the excretory cell. In addition, a reduction-of-function mutant in the par gene
pkc-3/aPKC displays lumen expansion defects, suggesting that PAR proteins may coordinate vesicle fusion with the apical surface of the membrane. To determine the role of PAR proteins during tubulogenesis, we are combining CRISPR-Cas9 genome editing with a recently described protein depletion strategy in C. elegans to generate conditional loss-of-function alleles of par genes, allowing us to remove their function specifically in the excretory cell. To deplete protein function, we can exogenously express the E3 ubiquitin ligase substrate-recognition subunit ZIF-1, enabling the rapid degradation of heterologous proteins tagged with a small zinc finger domain (ZF1). As PAR proteins are well known for their essential roles during embryogenesis, we characterized promoter constructs that express ZIF-1 specifically in the excretory canal from late embryonic stages through adulthood to enable PAR loss-of-function only in this cell type. Using this tissue-specific depletion strategy, we aim to identify the polarity cues that membrane-targeted vesicles receive during lumen expansion to better understand the initial steps of seamless tube formation.