We are interested in the mechanisms establishing muscle diversity in C. elegans. The NK class of homeodomain proteins are a set of regulatory factors with a broad evolutionary distribution and a variety of expression patterns in both muscle and nonmuscle tissue. Analysis of pharyngeal myosin regulation led to the identification of a member of this family,
ceh-22, which appears to mediate aspects of pharyngeal gene expression (see abstract by P. Okkema et al.). To determine the extent of the NK homeodomain family in C. elegans we have used a degenerate primer based PCR strategy. Among several candidates from the initial PCR, we have so far characterized one gene, denoted
ceh-24. The CEH-24 homeodomain falls into the NK class, but is closer to diverse members of the NK family seen in other species than to CEH-22. In addition to the homeodomain, CEH-24 contains an acid activation domain C-terminal to the homeodomain.
ceh-24 maps (thanks to Alan Coulson) to chromosome V just left of
him-5. We are in the process of determining the
ceh-24 expression pattern using several approaches (in situs, antibodies, and lacZ fusions). lacZ reporter constructs have been the first to yield results; these have been quite intriguing. We started with a large construct with the first 3 exons of
ceh-24 and approximately 8 kb upstream. In hermaphrodites, beta-galactosidase is detected in the eight vulva muscle cells, muscle
m8 of the pharynx, and 6-8 unidentified non-pharyngeal cells in the head (presumptive neurons). In males, the same staining pattern is seen in the head and pharynx. Instead of vulval muscle, we see a set of male tail cells that may be lineally equivalent to vulval muscle. Preliminary deletion analysis of upstream sequences suggests that distinct elements contribute to
m8 and vulval activity of the promoter.