C. elegans serves as a model system for elucidating the genetic basis of programmed cell death. Genetic analysis has provided evidence for a core apoptotic pathway in which the Bcl-2 homolog CED-9 regulates the activation of the effector caspase CED-3 via CED-4. Caspases are modular cysteine proteases with a regulatory amino-terminal prodomain and two catalytic carboxy-terminal subunits. In mammalian systems, some caspases act in sequential proteolytic cascades, where regulatory caspases respond to death signals and transduce these signals by proteolytic cleavage of effector caspases. In contrast to mammalian systems, CED-3 is the only caspase known to be involved in programmed cell death in C. elegans. We have recently cloned cDNAs for two further caspase homologs,
csh-2 and
csh-3. The catalytic residues are conserved between CED-3, CSH-2 and CSH-3, but some critical residues defining the substrate-binding pocket of CED-3 are not conserved. Further, the prodomains of CED-3, CSH-2 and CSH-3 are divergent, suggesting that these three proteases respond to different signals. Preliminary in vitro experiments indicate that CSH-2 has catalytic activity against synthetic tetrapeptide substrates. Extracts from E. coli expressing the CSH-2 catalytic domain, as a 6xHis-fusion protein in E. coli, prefer the tetrapeptide YVAD to DEVD. Considering that a large number of
ced-3 alleles have been isolated in independent genetic screens, it is reasonable to propose that CED-3 is the only caspase required for programmed cell death in C. elegans. However, the presence of multiple caspases in C. elegans suggests that a death-inducing protease cascade may exist in nematodes. To explore this hypothesis, we have analyzed the cell death phenotype of a deletion allele of
csh-2. This allele,
csh-2(
nr2018), prematurely truncates
csh-2 upsteam of the catalytic domain. Worms homozygous for
csh-2(
nr2018) display no defects in programmed cell death. The cell death phenotypes in well-characterized cell death mutant backgrounds is neither enhanced nor suppressed by
csh-2(
nr2018), suggesting that
csh-2 is either redundant, or not involved in cell death. We are presently generating a genomic deletion of the
csh-3 locus to perform similar analyses and to address caspase redundancy in C. elegans.