Sex determination is accomplished via highly disparate mechanisms in different phyla, and the homologous sex determination genes of closely related species often undergo rapid molecular evolution. To systematically explore how sex determination evolves over short, tractable time scales, we are developing Caenorhabditis briggsae as a true genetic system. Until now, the function of C. briggsae sex determination genes has been assessed using RNAi. However, RNAi rarely eliminates all target expression and it is not suitable for suppressor screens, epistasis and mosaic analyses, etc. Such genetic approaches are essential for accurate reconstruction of an entire pathway. Further, RNAi targeting of the C. briggsae and C. remanei fem genes suggests there may be large differences in germline fem function between these species1-3, a result that, if verified, would have major implications for the evolution of hermaphroditism in the genus. These results may in fact be due to divergence in the tissue-specificity of fem function, but could also merely reflect limited efficacy of RNAi. This can be resolved by the isolation of true mutations, done most readily in the hermaphrodite C. briggsae.Here, we describe the isolation of loss-of-funtion Cb-tra mutant alleles, work being carried out in conjunction with the Pilgrim Lab at the Univ. of Alberta (see poster by de Carvalho and Pilgrim). Using standard C. elegans methods, we have obtained six such alleles. 4 are completely penetrant at all temperatures, whereas 2 are partially rescued at 15 degrees . The alleles appear to fall into two complementation groups, one resembling
Ce-tra-1 and the other
Ce-tra-2 in phenotype. Mapping with visible and SNP markers is consistent with the
tra-2-like complementation group (
nm1 and
nm10 alleles) being actual
Cb-tra-2 mutations. Sequencing of these alleles is underway. If they are indeed
Cb-tra-2 mutants, then the penetrance of
Cb-tra-2(RNAi)), about 10%1,4, is much lower than that of true mutants. This suggests that the qualitative species differences seen in fem gene RNAi phenotypes may also be the result of incomplete target inactivation.1Haag, ES, Wang, S, and Kimble, J (2002). Current Biol. 12: 2035-41; 2Stodhard, P, Hansen, D, and Pilgrim, D (2002). J. Mol. Evol. 54: 267-282; 3Stodhard, P, and Pilgrim, D (2003). BioEssays 25: 221-31; 4Kuwabara, PE (1996). Genetics 144: 597-607.