WBPaper00044037:eat-2_upregulated The criteria for differential gene regulation included a greater than 1.5-fold change in expression compared to wild-type, a false discovery rate less than 0.05, and greater than 10 reads when normalized to the base mean. Statistical analysis and drawing of plots was performed in R using the bioconductor package Deseq (Anders, Huber 2010) and R function gplots.
Genes with significantly increased expression in eat-2(ad465) comparing to N2.
WBPaper00044037:eat-2_downregulated The criteria for differential gene regulation included a greater than 1.5-fold change in expression compared to wild-type, a false discovery rate less than 0.05, and greater than 10 reads when normalized to the base mean. Statistical analysis and drawing of plots was performed in R using the bioconductor package Deseq (Anders, Huber 2010) and R function gplots.
Genes with significantly decreased expression in eat-2(ad465) comparing to N2.
WBPaper00044037:eat-2_regulated_nhr-62_dependent The criteria for differential gene regulation included a greater than 1.5-fold change in expression compared to wild-type, a false discovery rate less than 0.05, and greater than 10 reads when normalized to the base mean. Statistical analysis and drawing of plots was performed in R using the bioconductor package Deseq (Anders, Huber 2010) and R function gplots.
Genes that showed differential expression in eat-2(ad465) comparing to N2, but expression levels were restored to wild type level in nhr-62(tm1818) background.