- WBPaper00045918:96h_infection_recovery_upregulated
Fold change > 2, p-value < 0.05.
Genes that showed increased expression after recovering from 72 hours of S. enterica SL1344 infection by shifting animals to E. coli HT115 plus Tetracycline plates for 24 hours.
- WBPaper00045918:96h_infection_recovery_downregulated
Fold change > 2, p-value < 0.05.
Genes that showed decreased expression after recovering from 72 hours of S. enterica SL1344 infection by shifting animals to E. coli HT115 plus Tetracycline plates for 24 hours.
- WBPaper00045918:120h_infection_recovery_upregulated
Fold change > 2, p-value < 0.05.
Genes that showed increased expression after recovering from 96 hours of S. enterica SL1344 infection by shifting animals to E. coli HT115 plus Tetracycline plates for 24 hours.
- WBPaper00056090:E.faecalis_downregulated_N2
Cuffcompare and Cuffdiff
Transcripts that showed significantly decreased expression in N2 after animals were exposed to E. faecalis OG1RF for 16 hours comparing to exposure to E. Coli OP50.
- WBPaper00056090:E.faecalis_upregulated_N2
Cuffcompare and Cuffdiff
Transcripts that showed significantly increased expression in N2 after animals were exposed to E. faecalis OG1RF for 16 hours comparing to exposure to E. Coli OP50.
- [cgc6390]:Cluster_E
hierarchical clustering
Germline-enriched and sex-biased expression profile cluster E.
- WBPaper00061007:HB101_downregulated
DESeq2 fold change > 2, p-value < 0.01.
Transcripts that showed significantly decreased expression after fed by bacteria E. coli HB101 for 30 generations comparing to animals fed by E. coli OP50.
- WBPaper00061007:HB115_downregulated
DESeq2 fold change > 2, p-value < 0.01.
Transcripts that showed significantly decreased expression after fed by bacteria E. coli HB115 for 30 generations comparing to animals fed by E. coli OP50.