- WBPaper00056474:ivermectin-resistent_vs_N2_upregulated_protein
p < 0.05
Proteins that showed significantly lower expression in ivermectin-resistent strain comparing to in N2, according to 2-DE and MS analysis. Ivermectin resistent strains were develped stepwise in plates contaings NGM with the addition of doses (1ng per ml)of ivermectin.
- WBPaper00056474:ivermectin-resistent_vs_N2_downregulated_protein
p < 0.05
Proteins that showed significantly lower expression in ivermectin-resistent strains comparing to in N2, according to 2-DE and MS analysis. Ivermectin resistent strains were develped stepwise in plates contaings NGM with the addition of doses (1ng per ml)of ivermectin.
- WBPaper00060014:set-2(tm1630)_upregulated
DESeq2 (v2.1.8.3) was used to determine DE genes and to generate principal component and scatter plots. DE genes with FDR < 0.05 were analysed using g:Profiler with Bonferroni correction.
Transcripts that showed significantly increased expression in set-2(tm1630) animals at embryo stage, comparing to in N2 animals.
- WBPaper00060014:set-2(zr2012)_downregulated
DESeq2 (v2.1.8.3) was used to determine DE genes and to generate principal component and scatter plots. DE genes with FDR < 0.05 were analysed using g:Profiler with Bonferroni correction.
Transcripts that showed significantly decreased expression in set-2(zr2012) animals at embryo stage, comparing to in N2 animals.
- WBPaper00060014:set-2(zr2012)_upregulated
DESeq2 (v2.1.8.3) was used to determine DE genes and to generate principal component and scatter plots. DE genes with FDR < 0.05 were analysed using g:Profiler with Bonferroni correction.
Transcripts that showed significantly increased expression in set-2(zr2012) animals at embryo stage, comparing to in N2 animals.
- WBPaper00060014:set-2(tm1630)_downregulated
DESeq2 (v2.1.8.3) was used to determine DE genes and to generate principal component and scatter plots. DE genes with FDR < 0.05 were analysed using g:Profiler with Bonferroni correction.
Transcripts that showed significantly decreased expression in set-2(tm1630) animals at embryo stage, comparing to in N2 animals.
- WBPaper00062684:pathogen_upregulated_N2
DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2.
Transcripts in N2 animals that showed significantly increased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)
- WBPaper00062684:pathogen_downregulated_CB4856
DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2.
Transcripts in CB4856 animals that showed significantly decreased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)
- WBPaper00062684:pathogen_upregulated_CB4856
DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2.
Transcripts in CB4856 animals that showed significantly increased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)