WBPaper00049018:ham-3(RNAi)_upregulated

Cuffdiff was used to identify differentially expressed genes. Transcripts that showed significantly increased expression in ham-3(RNAi) comparing to in control animals.

WBPaper00049018:ham-3(RNAi)_downregulated

Cuffdiff was used to identify differentially expressed genes. Transcripts that showed significantly decreased expression in ham-3(RNAi) comparing to in control animals.

WBPaper00036231:long-telomeres_downregulated

t statistics Down-regulated genes in long telomeric worms(HRP-1

WBPaper00036231:long-telomeres_upregulated

t statistics Up-regulated genes in long telomeric worms (HRP-1

WBPaper00035588:alg-1(-)_upregulated

t-statistic difference of > 2.5 with p < 0.01. Genes upregulated by alg-1(-).

WBPaper00040990:PA14_downregulated

Gene expression profiles obtained with microarrays were analyzed by a multi-class t-test using Significance Analysis of Microarrays (SAM), implemented as part of the TMEV software package. Based on T statistics the test retrieves genes with a T value above a cutoff score estimated to give the desired false discovery rate (selected to be 10%). Genes with expression level repressed by bacteria strain PA14.

WBPaper00040990:PA14_upregulated

Gene expression profiles obtained with microarrays were analyzed by a multi-class t-test using Significance Analysis of Microarrays (SAM), implemented as part of the TMEV software package. Based on T statistics the test retrieves genes with a T value above a cutoff score estimated to give the desired false discovery rate (selected to be 10%). Genes with expression level induced by bacteria strain PA14.

WBPaper00040731:Static_Magnetic_Field_upregulated

student t-test, p-value < 0.05 Genes with significant increased expression after exposed to static maganetic field

WBPaper00040731:Static_Magnetic_Field_downregulated

student t-test, p-value < 0.05 Genes with significant decreased expression after exposed to static maganetic field

WBPaper00056471:flcn-1(ok975)_upregulated

Student's t-test. Transcripts that showed significantly increased expression in flcn-1(ok975) comparing to in N2.