WBPaper00057162:meg-3_meg-4_upregulated_sRNA

DESeq2 Genes with small RNAs upregulated in all four meg-3(ax3055) meg-4(ax3052) strains comparing to N2

WBPaper00057162:meg-3_meg-4_downregulated_sRNA

DESeq2 Genes with small RNAs downregulated in all four meg-3(ax3055) meg-4(ax3052) strains comparing to N2

WBPaper00056868:P.aeruginosa_downregulated_smallRNA

DESeq2, FDR < 0.05 Small RNAs (21-26nt) that showed significantly decreased expression after L4 animals were exposed to P .aeruginosa strain PA14 for 24 hours.

WBPaper00056868:P.aeruginosa_upregulated_smallRNA

DESeq2, FDR < 0.05 Small RNAs (21-26nt) that showed significantly increased expression after L4 animals were exposed to P .aeruginosa strain PA14 for 24 hours.

WBPaper00045090:RDE-12_dependent

N.A. Target genes whose small RNA levels are reduced more than 3-fold in the rde-12 mutants compared to N2 in the ERGO-1 and RDE-1 pathways. The minimal read cutoff is 20 in this analysis

WBPaper00053318:mir-71(n4115)_downregulated_mRNA

Differential expression for both small RNA- and mRNA-seq data was tested using DESeq2; P-values were adjusted for multiple testing by Benjamini-Hochberg method. Transcripts that showed significantly decreased expression in mir-71(n4115) comparing to in N2 at 4-days post L4 adult hermaphrodite.

WBPaper00053318:mir-71(n4115)_upregulated_miRNA

Differential expression for both small RNA- and mRNA-seq data was tested using DESeq2; P-values were adjusted for multiple testing by Benjamini-Hochberg method. MicroRNAs that showed significantly increased expression in mir-71(n4115) comparing to in N2 at 4-days post L4 adult hermaphrodite.

WBPaper00053318:Aging_upregulated_miRNA_N2

Differential expression for both small RNA- and mRNA-seq data was tested using DESeq2; P-values were adjusted for multiple testing by Benjamini-Hochberg method. MicroRNAs that showed significantly increased expression in Day 5 (5-days post-L4) vs. Day 0 (L4 larva) of adulthood N2 animals.

WBPaper00053318:Aging_downregulated_miRNA_N2

Differential expression for both small RNA- and mRNA-seq data was tested using DESeq2; P-values were adjusted for multiple testing by Benjamini-Hochberg method. MicroRNAs that showed significantly decreased expression in Day 5 (5-days post-L4) vs. Day 0 (L4 larva) of adulthood N2 animals.

WBPaper00053318:Aging_downregulated_mRNA_N2

Differential expression for both small RNA- and mRNA-seq data was tested using DESeq2; P-values were adjusted for multiple testing by Benjamini-Hochberg method. Transcripts that showed significantly decreased expression in Day 5 (5-days post-L4) vs. Day 0 (L4 larva) of adulthood N2 animals.