- WBPaper00065623:104
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 104 expressed in: AWA.
- WBPaper00064871:PA14_upregulated_AWA
P values are derived from two-sided exact test used in the R package edgeR and the FDR values are BenjaminiHochberg adjusted P values. FDR < 0.05 (set by WormBase Curator).
Transcripts differentially expressed between AWA neurons of adult hermaphrodite worms exposed to PA14 and AWA neurons of adult hermaphrodite worms exposed to OP50 for 4-6 hours.
- WBPaper00064871:PA14-gacA()_upregulated_AWA
P values are derived from two-sided exact test used in the R package edgeR and the FDR values are BenjaminiHochberg adjusted P values. FDR < 0.05 (set by WormBase Curator).
Transcripts differentially expressed between AWA neurons of adult hermaphrodite worms exposed to PA14-gacA() and AWA neurons of adult hermaphrodite worms exposed to OP50 for 4-6 hours.
- WBPaper00061651:AWA_enriched
Genes that pass the Bonferroni threshold for multiple comparisons (q < 0.05) are significantly enriched.
Transcripts enriched in AWA according to single cell RNAseq.
- WBPaper00064871:P.fluorescens_downregulated_AWA
P values are derived from two-sided exact test used in the R package edgeR and the FDR values are BenjaminiHochberg adjusted P values. FDR < 0.05 (set by WormBase Curator).
Transcripts differentially expressed between AWA neurons of adult hermaphrodite worms exposed to P. fluorescens and AWA neurons of adult hermaphrodite worms exposed to OP50 for 4-6 hours.
- WBPaper00064871:PA14_downregulated_AWA
P values are derived from two-sided exact test used in the R package edgeR and the FDR values are BenjaminiHochberg adjusted P values. FDR < 0.05 (set by WormBase Curator).
Transcripts differentially expressed between AWA neurons of adult hermaphrodite worms exposed to PA14 and AWA neurons of adult hermaphrodite worms exposed to OP50 for 4-6 hours.
- WBPaper00064871:PA14-gacA()_downregulated_AWA
P values are derived from two-sided exact test used in the R package edgeR and the FDR values are BenjaminiHochberg adjusted P values. FDR < 0.05 (set by WormBase Curator).
Transcripts differentially expressed between AWA neurons of adult hermaphrodite worms exposed to PA14-gacA() and AWA neurons of adult hermaphrodite worms exposed to OP50 for 4-6 hours.
- WBPaper00064494:postdauer_downregulated_AWA
DESeq 2, FDR < 0.05.
Transcripts that showed significantly decreased expression at the AWA neurons of in postdauer adults comparing to adult animals that bypassed the dauger stage.
- WBPaper00064871:P.fluorescens_upregulated_AWA
P values are derived from two-sided exact test used in the R package edgeR and the FDR values are BenjaminiHochberg adjusted P values. FDR < 0.05 (set by WormBase Curator).
Transcripts differentially expressed between AWA neurons of adult hermaphrodite worms exposed to P. fluorescens and AWA neurons of adult hermaphrodite worms exposed to OP50 for 4-6 hours.
- WBPaper00064494:postdauer_upregulated_AWA
DESeq 2, FDR < 0.05.
Transcripts that showed significantly increased expression at the AWA neurons of in postdauer adults comparing to adult animals that bypassed the dauger stage.