WBPaper00064107:lin-52(3A)_vs_lin-52(WT)_downregulated

DESeq2, Fold < -1.5 or > 1.5, q <0.05 Transcripts that showed significantly decreased expression in lin-52(3A)/lin-52(bn151(lin-52[L42A,C44A,E46A]-GFP-3xFLAG)) comparing to in lin-52(WT)/lin-52(bn139[lin-52-GFP-3xFLAG]).

WBPaper00064107:lin-52(3A)_vs_lin-52(WT)_upregulated

DESeq2, Fold < -1.5 or > 1.5, q <0.05 Transcripts that showed significantly increased expression in lin-52(3A)/lin-52(bn151(lin-52[L42A,C44A,E46A]-GFP-3xFLAG)) comparing to in lin-52(WT)/lin-52(bn139[lin-52-GFP-3xFLAG]).

WBPaper00053289:DREAM-target

N.A. Transcripts with promoter regions binding DREAM protein complex, according to ChIP-seq of E2F-DP (DPL-1 and EFL-1) and MuvB (LIN-9, LIN-37, LIN-52, and LIN-54) of N2 late embryo.

WBPaper00060084:cco-1(RNAi)_upregulated_lin-40(yth27)

N.A. Transcripts that showed significantly increased expression in lin-40(yth27);cco-1(RNAi) animals comparing to lin-40(yth27) animals injected with empty vector.

WBPaper00060084:cco-1(RNAi)_downregulated_lin-40(yth27)

N.A. Transcripts that showed significantly decreased expression in lin-40(yth27);cco-1(RNAi) animals comparing to lin-40(yth27) animals injected with empty vector.

WBPaper00037946:LIN-39_interacting

N.A. Binding targets of LIN-39, according to ChIP-Seq analysis.

WBPaper00050717:let-7(n2853)_lin-41(xe11)_downregulated

N.A. Transcripts downregulated consistently in let-7(n2853), lin-41(xe11) and lin-41(xe11); let-7(n2853) mutant worms, compared to wild-type worms (on RPF, ribosome-protected fragments, level)

WBPaper00050717:let-7(n2853)_lin-41(xe11)_upregulated

N.A. Transcripts upregulated consistently in let-7(n2853), lin-41(xe11) and lin-41(xe11); let-7(n2853) mutant worms, compared to wild-type worms (on RPF, ribosome-protected fragments, level)

WBPaper00051310:LIN-41_interacting

N.A. Proteins that physically interacted with LIN-41-GFP, according to immunoprecipitation.

WBPaper00048637:lin-35(n745)_starvation_upregulated

Statistical t-test: P < 0.015 for lin-35(n745) analysis with a threshold of 2-fold ratio of mis-regulation. Genes with significantly increased expression in lin-35(n745) comparing to in N2 in starvation condition.