[cgc6390]:Cluster_B

hierarchical clustering Germline-enriched and sex-biased expression profile cluster B.

WBPaper00052881:B.subtilis-biofilm_upregulated

CuffDiff q-value < 0.05. Transcripts that showed significantly increased expression after the formation of B. subtilis biofilm

WBPaper00052881:B.subtilis-biofilm_downregulated

CuffDiff q-value < 0.05. Transcripts that showed significantly decreased expression after the formation of B. subtilis biofilm

WBPaper00051164:Nel-protein-infection_regulated

p<0.05 Proteins that showed differential expression after 4 hours of treatment by bacterium B. thuringiensis YBT1520 Nel protein that can cause necrosis.

WBPaper00066610:Leptomycin-B_upregulated_25C_20h

p < 0.01, logFC > 1 or p < 0.01, logFC < -1. Transcripts that showed significantly increased expression in animals exposed to Leptomycin B for 20 hours at 25C.

WBPaper00066610:Leptomycin-B_upregulated_2C_3h

p < 0.01, logFC > 1 or p < 0.01, logFC < -1. Transcripts that showed significantly increased expression in animals exposed to Leptomycin B for 3 hours at 2C.

WBPaper00066610:Leptomycin-B_downregulated_2C_3h

p < 0.01, logFC > 1 or p < 0.01, logFC < -1. Transcripts that showed significantly decreased expression in animals exposed to Leptomycin B for 3 hours at 2C.

WBPaper00066610:Leptomycin-B_downregulated_25C_20h

p < 0.01, logFC > 1 or p < 0.01, logFC < -1. Transcripts that showed significantly decreased expression in animals exposed to Leptomycin B for 20 hours at 25C.

WBPaper00044091:Bpseudomallei_regulated_qPCR-confirmed

qPCR and microarray confirmed differentially expressed genes. Genes that showed differential expression in adult animals after 12 hour exposure to B. pseudomallei R15 vs. exposure to OP50, confirmed by microarray and qPCR.

WBPaper00053814:15C_downregulated_PY79

DESeq2 and EdgeR, adjusted p-value < 0.05. Transcripts that are significantly downregulated at 15C compared to both 25C and 20C, with no statistical difference between 25C and 20C, in worms feeding B. subtilis PY79.