- WBPaper00055226:ADR-2_target_N2
DESeq2, p-value < 0.05 and a fold enrichment log2fold > 0.5.
Genes that exhibit a differential enrichment (p-value < 0.05 and a fold enrichment (log2fold)> 0.5) between the ADR-2 IPs from N2 and adr-2(ok735)worms.
- WBPaper00029437:rde-4_upregulated
Statistical t-test: P < 0.05 for rde-4(-/-) and rde-1(-/-) analyses; P < 0.01 for dcr-1(-/-) analysis with a threshold of 1.5-fold misregulation.
Genes upregulated in rde-4(-/-) adult animals by at least 1.5 fold and P < 0.05, as determined by a multisample t-test.
- WBPaper00028789:PA14_vs_OP50_upregulated_4hr
At least 2 fold and P < 0.01, as determined by a t-test.
Genes upregulated in worms grown on P. aeruginosa PA14 as compared to worms grown on OP50 for 4 hours by at least 2 fold and P < 0.01, as determined by a t-test.
- WBPaper00028789:PA14_vs_OP50_downregulated_8hr
At least 2 fold and P < 0.01, as determined by a t-test.
Genes downregulated in worms grown on P. aeruginosa PA14 as compared to worms grown on OP50 for 8 hours by at least 2 fold and P < 0.01, as determined by a t-test.
- WBPaper00028789:PA14_vs_OP50_upregulated_8hr
At least 2 fold and P < 0.01, as determined by a t-test.
Genes upregulated in worms grown on P. aeruginosa PA14 as compared to worms grown on OP50 for 8 hours by at least 2 fold and P < 0.01, as determined by a t-test.
- WBPaper00028789:PA14_vs_OP50_downregulated_4hr
At least 2 fold and P < 0.01, as determined by a t-test.
Genes downregulated in worms grown on P. aeruginosa PA14 as compared to worms grown on OP50 for 4 hours by at least 2 fold and P < 0.01, as determined by a t-test.
- WBPaper00029437:rde-1_downregulated
Statistical t-test: P < 0.05 for rde-4(-/-) and rde-1(-/-) analyses; P < 0.01 for dcr-1(-/-) analysis with a threshold of 1.5-fold misregulation.
Genes downregulated in rde-1(-/-) adult animals by at least 1.5 fold and P < 0.05, as determined by a multisample t-test.
- WBPaper00029437:rde-1_upregulated
Statistical t-test: P < 0.05 for rde-4(-/-) and rde-1(-/-) analyses; P < 0.01 for dcr-1(-/-) analysis with a threshold of 1.5-fold misregulation.
Genes upregulated in rde-1(-/-) adult animals by at least 1.5 fold and P < 0.05, as determined by a multisample t-test.
- WBPaper00029437:rde-4_downregulated
Statistical t-test: P < 0.05 for rde-4(-/-) and rde-1(-/-) analyses; P < 0.01 for dcr-1(-/-) analysis with a threshold of 1.5-fold misregulation.
Genes downregulated in rde-4(-/-) adult animals by at least 1.5 fold and P < 0.05, as determined by a multisample t-test.
- WBPaper00055226:ADR-2_target_adr-1(tm668)
DESeq2, p-value < 0.05 and a fold enrichment log2fold > 0.5.
Genes that exhibit a differential enrichment (p-value < 0.05 and a fold enrichment (log2fold)> 0.5) between the ADR-2 IPs from adr-1(tm668) worms and adr-2(ok735) worm.