- WBPaper00065749:endu-2(tm4977)_upregulated
The DESeq2 (GalaxyVersion 2.11.40.6 + galaxy1) was used to determine differentiallyexpressed features from count tables of differential transcript abundances. log2FC > 1, FDR < 0.01.
Transcripts that showed significantly increased expression in endu-2(tm4977) comparing to in N2 animals at young adult stage.
- WBPaper00065749:endu-2(tm4977)_downregulated
The DESeq2 (GalaxyVersion 2.11.40.6 + galaxy1) was used to determine differentiallyexpressed features from count tables of differential transcript abundances. log2FC > 1, FDR < 0.01.
Transcripts that showed significantly decreased expression in endu-2(tm4977) comparing to in N2 animals at young adult stage.
- WBPaper00060703:nas-38(ok3407)_upregulated
A feature was classified upregulated if its FDR-corrected p-value was <= 0.05 and fold change was >= 2. Analogously, a gene was classified downregulated if its FDR-corrected p-value was <= 0.05 and fold change was <= -2.
Transcripts that showed significantly increased expression in nas-38(ok3407) comparing to in N2.
- WBPaper00060703:nas-38(ok3407)_downregulated
A feature was classified upregulated if its FDR-corrected p-value was <= 0.05 and fold change was >= 2. Analogously, a gene was classified downregulated if its FDR-corrected p-value was <= 0.05 and fold change was <= -2.
Transcripts that showed significantly decreased expression in nas-38(ok3407) comparing to in N2.
- WBPaper00065749:Heat-Shock_downregulated_N2
The DESeq2 (GalaxyVersion 2.11.40.6 + galaxy1) was used to determine differentiallyexpressed features from count tables of differential transcript abundances. log2FC > 1, FDR < 0.01.
Transcripts that showed significantly decreased expression immediately after 1-day post L4 adult hermaphrodite N2 animals were exposed to 35C for 1 hour.
- WBPaper00060006:nfyb-1(cu13)_downregulated_transcript
After feature quantification with cuffquant v2.2.1, differential gene expression was done with Cuffdiff v2.2.1. Differentially expressed genes (q value < 0.05, false-discovery rate-adjusted P values of the test statistic) of each pairwise comparison were identified.
Mitochondrial transcripts that showed significntly decreased expression in nfyb-1(cu13), comparing to in N2.
- WBPaper00060006:nfyb-1(cu13)_upregulated_transcript
After feature quantification with cuffquant v2.2.1, differential gene expression was done with Cuffdiff v2.2.1. Differentially expressed genes (q value < 0.05, false-discovery rate-adjusted P values of the test statistic) of each pairwise comparison were identified.
Mitochondrial transcripts that showed significntly increased expression in nfyb-1(cu13), comparing to in N2.
- WBPaper00065749:Heat-Shock_upregulated_N2
The DESeq2 (GalaxyVersion 2.11.40.6 + galaxy1) was used to determine differentiallyexpressed features from count tables of differential transcript abundances. log2FC > 1, FDR < 0.01.
Transcripts that showed significantly increased expression immediately after 1-day post L4 adult hermaphrodite N2 animals were exposed to 35C for 1 hour.
- WBPaper00065749:Heat-Shock-With-Recovery_downregulated_N2
The DESeq2 (GalaxyVersion 2.11.40.6 + galaxy1) was used to determine differentiallyexpressed features from count tables of differential transcript abundances. log2FC > 1, FDR < 0.01.
Transcripts that showed significantly decreased expression 4 hours after 1-day post L4 adult hermaphrodite N2 animals were exposed to 35C for 1 hour.
- WBPaper00065749:Heat-Shock-With-Recovery_upregulated_N2
The DESeq2 (GalaxyVersion 2.11.40.6 + galaxy1) was used to determine differentiallyexpressed features from count tables of differential transcript abundances. log2FC > 1, FDR < 0.01.
Transcripts that showed significantly increased expression 4 hours after 1-day post L4 adult hermaphrodite N2 animals were exposed to 35C for 1 hour.