WBPaper00061340:B_F_K_Kp_U_Y

Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Top 300 transcripts enriched in B cell, F cell, K cell, K' cell, U cell, Y cell according to single cell RNAseq.

WBPaper00061340:Rectal_cell

Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Top 300 transcripts enriched in B cell, F cell, K cell, K' cell, U cell, Y cell, rect_D, rect_VL, rect_VR according to single cell RNAseq.

WBPaper00061340:K_Kprime

Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Top 300 transcripts enriched in K cell, K' cell according to single cell RNAseq.

WBPaper00053308:NMD(-)_upregulated_SMD-2_non-binding_ClassIII

edgeR Transcripts that showed increased expression in smg-1(r910) and smg-1(r910) smg-2(r915) mutants comparing to in N2, and their mRNAs do not co-purify with SMG-2.

WBPaper00053308:NMD(-)_downregulated_SMD-2_non-binding_ClassIV

edgeR Transcripts that showed decreased expression in smg-1(r910) and smg-1(r910) smg-2(r915) mutants comparing to in N2, and their mRNAs do not co-purify with SMG-2.

[cgc6390]:Cluster_B

hierarchical clustering Germline-enriched and sex-biased expression profile cluster B.

WBPaper00052881:B.subtilis-biofilm_upregulated

CuffDiff q-value < 0.05. Transcripts that showed significantly increased expression after the formation of B. subtilis biofilm

WBPaper00052881:B.subtilis-biofilm_downregulated

CuffDiff q-value < 0.05. Transcripts that showed significantly decreased expression after the formation of B. subtilis biofilm

WBPaper00051164:Nel-protein-infection_regulated

p<0.05 Proteins that showed differential expression after 4 hours of treatment by bacterium B. thuringiensis YBT1520 Nel protein that can cause necrosis.

WBPaper00066610:Leptomycin-B_upregulated_25C_20h

p < 0.01, logFC > 1 or p < 0.01, logFC < -1. Transcripts that showed significantly increased expression in animals exposed to Leptomycin B for 20 hours at 25C.