WBPaper00036429:glp-1(oz112)_upregulated

The data were analyzed as described previously (Reinke et al., 2004), with a cut-off of > 1.8, p < 0.001 (Student's t test) used to define the 202 genes with enriched expression in the glp-1(oz112) mutant relative to controls. Genes with higher expression in glp-1(oz112) mutants than in wild type animals. (> 1.8-fold, p<0.01; based on four independently prepared sets of samples).

WBPaper00032062:age_regulated_genes

ANOVA, p < 0.0001. Genes that showed significantly changed expression during aging (ANOVA, p < 0.0001)

WBPaper00062684:pathogen_upregulated_N2

DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2. Transcripts in N2 animals that showed significantly increased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)

WBPaper00062684:pathogen_downregulated_CB4856

DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2. Transcripts in CB4856 animals that showed significantly decreased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)

WBPaper00062684:pathogen_upregulated_CB4856

DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2. Transcripts in CB4856 animals that showed significantly increased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)

WBPaper00062684:pathogen_downregulated_N2

DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2. Transcripts in N2 animals that showed significantly decreased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)

WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected

p < 0.05 Transcripts that showed significantly increased expression in zip-3(gk3164) comparing to in N2, after exposed to P. aeruginosa for 18 hours.

WBPaper00066610:Camptothecin_downregulated_25C_20h

p < 0.01, logFC > 1 or p < 0.01, logFC < -1. Transcripts that showed significantly decreased expression in animals exposed to Camptothecin for 20 hours at 25C.

WBPaper00066610:Camptothecin_downregulated_2C_3h

p < 0.01, logFC > 1 or p < 0.01, logFC < -1. Transcripts that showed significantly decreased expression in animals exposed to Camptothecin for 3 hours at 2C.

WBPaper00066610:Camptothecin_upregulated_25C_20h

p < 0.01, logFC > 1 or p < 0.01, logFC < -1. Transcripts that showed significantly increased expression in animals exposed to Camptothecin for 20 hours at 25C.