WBPaper00066610:Leptomycin-B_downregulated_25C_20h

p < 0.01, logFC > 1 or p < 0.01, logFC < -1. Transcripts that showed significantly decreased expression in animals exposed to Leptomycin B for 20 hours at 25C.

WBPaper00066610:Leptomycin-B_upregulated_25C_20h

p < 0.01, logFC > 1 or p < 0.01, logFC < -1. Transcripts that showed significantly increased expression in animals exposed to Leptomycin B for 20 hours at 25C.

WBPaper00066610:Leptomycin-B_upregulated_2C_3h

p < 0.01, logFC > 1 or p < 0.01, logFC < -1. Transcripts that showed significantly increased expression in animals exposed to Leptomycin B for 3 hours at 2C.

WBPaper00066610:Leptomycin-B_downregulated_2C_3h

p < 0.01, logFC > 1 or p < 0.01, logFC < -1. Transcripts that showed significantly decreased expression in animals exposed to Leptomycin B for 3 hours at 2C.

WBPaper00051164:Nel-protein-infection_regulated

p<0.05 Proteins that showed differential expression after 4 hours of treatment by bacterium B. thuringiensis YBT1520 Nel protein that can cause necrosis.

WBPaper00053814:15C_downregulated_PY79

DESeq2 and EdgeR, adjusted p-value < 0.05. Transcripts that are significantly downregulated at 15C compared to both 25C and 20C, with no statistical difference between 25C and 20C, in worms feeding B. subtilis PY79.

WBPaper00053814:25C_upregulated_PY79

DESeq2 and EdgeR, adjusted p-value < 0.05. Transcripts that are significantly upregulated at 25C compared to both 15C and 20C, with no statistical difference between 15C and 20C, in worms feeding B. subtilis PY79.

WBPaper00053814:15C_upregulated_PY79

DESeq2 and EdgeR, adjusted p-value < 0.05. Transcripts that are significantly upregulated at 15C compared to both 25C and 20C, with no statistical difference between 25C and 20C, in worms feeding B. subtilis PY79.

WBPaper00053814:25C_downregulated_PY79

DESeq2 and EdgeR, adjusted p-value < 0.05. Transcripts that are significantly downregulated at 25C compared to both 15C and 20C, with no statistical difference between 15C and 20C, in worms feeding B. subtilis PY79.

WBPaper00049498:npr-1(ur89)_regulated_1

Estimation of transcript abundance and significantly differentially expressed genes were identified by Cuffdiff using the quartile normalization method. Transcripts with a significant change between different conditions (adjusted p-value < 0.01 by the false discovery rate, FDR) were treated as signature for each comparison. Genes that showed significantly altered expression between N2 and npr-1(ur89) strains exposed to either the nematocidal B. thuringiensis B-18247, the pathogenic P. aeruginosa PA14, or the control E. coli OP50.