WBPaper00046212:HeatStress_Up-G2_Down-G3

N.A. Genes that showed increased expression in 2nd and decreased expression in 3rd generation after heat stress, with 1st generation grown in 20C, 2nd generation grown in 25C and 3rd generation grown in 20C, comparing to animals grown in 20C for three generations.

WBPaper00062197:mec-8_downregulated_TRN

N.A. Transcripts that showed significanlty decreased expression in touch receptor neurons in mec-8 (e398) animals comparing to in touch receptor neurons in N2 animals at L4 larva stage.

WBPaper00062197:mec-8_upregulated_TRN

N.A. Transcripts that showed significanlty increased expression in touch receptor neurons in mec-8 (e398) animals comparing to in touch receptor neurons in N2 animals at L4 larva stage.

WBPaper00049001:EVN_enriched

DESeq was used. Genes overexpressed 2 - 11 fold in EVNs were considered differentially expressed. Transcripts enriched in EVN neurons, by comparing expressin in EVN cells and in whole worm lysates.

WBPaper00046212:HeatStress_heritably_upregulated

N.A. Genes that showed increased expression in 2nd and 3rd generation after heat stress, with 1st generation grown in 20C, 2nd generation grown in 25C and 3rd generation grown in 20C, comparing to animals grown in 20C for three generations.

WBPaper00046212:HeatStress_heritably_downregulated

N.A. Genes that showed decreased expression in 2nd and 3rd generation after heat stress, with 1st generation grown in 20C, 2nd generation grown in 25C and 3rd generation grown in 20C, comparing to animals grown in 20C for three generations.

WBPaper00052885:hrde-1(tm1200)-emb-4(qm31)_regulated

DESeq2 v3.2.2 Transcripts that showed differential expression in hrde-1(tm1200) as well as in emb-4(qm31), comparing to in N2.

WBPaper00066256:skn-1gf(lax188)_regulated

DESeq2, p-value < 0.05. Transcripts that showed significantly altered expression in skn-1gf(lax188) comparing to in WT animals in ASI neuron.

WBPaper00054872:egl-9(sa307)_upregulated

Bioconductor's edgeR package in the R 3.2.3, adjusted p value < 0.05. Transcripts with significantly increased expression in egl-9(sa307) comparing to in N2.

WBPaper00061466:nath-10(icb102)_downregulated

Differences in gene expression were calculated using the negative binomial test in the DESeq package (FDR = 0.1). Transcripts that showed significantly decreased expression in nath-10(icb102) comparing to in N2 at L2 larva stage.