- WBPaper00040412:germline-regulated_daf-12_target
All lists used an Fs:Ptab 0.01 cutoff.
Genes that were regulated by DAF-12 in response to germline loss, identified by comparing differentially expression genes between glp-1(e2141ts, 25C) vs. glp-1(e2141ts, 20C) and daf-12;glp-1(e2141ts, 25C) vs. daf-12;glp-1(e2141ts, 20C).
- WBPaper00040412:germline-regulated_daf-16_target
All lists used an Fs:Ptab 0.01 cutoff.
Genes that were regulated by DAF-16 in response to germline loss, identified by comparing differentially expression genes between glp-1(e2141ts, 25C) vs. glp-1(e2141ts, 20C) and daf-16;glp-1(e2141ts, 25C) vs. daf-16;glp-1(e2141ts, 20C).
- WBPaper00050094:glp-1(gf)_downregulated
Fold change > 2.
Transcripts that showed significantly decreased expression in the dissected gonads of gld-2(q492) gld-1(q485) (I); glp-1(ar202)(III) (glp-1(gf) NOTCH ON), comparing to in the dissected gonads of gld-2(q492) gld-1(q485) (I); glp-1(e2144) (glp-1(lf) NOTCH OFF)
- WBPaper00050094:glp-1(gf)_upregulated
Fold change > 2.
Transcripts that showed significantly increased expression in the dissected gonads of gld-2(q492) gld-1(q485) (I); glp-1(ar202)(III) (glp-1(gf) NOTCH ON), comparing to in the dissected gonads of gld-2(q492) gld-1(q485) (I); glp-1(e2144) (glp-1(lf) NOTCH OFF)
- WBPaper00059440:GLP-1_represseded
edgeR fold change >= 2, FDR <= 0.05.
Transcripts repressed by glp-1(ar202), a gain-of-function allele of glp-1, in the gld-2(q497) gld-1(q485) background at young adult stage, comparing to glp-1(q175) null allele.
- WBPaper00059440:GLP-1_activated
edgeR fold change >= 2, FDR <= 0.05.
Transcripts activated by glp-1(ar202), a gain-of-function allele of glp-1, in the gld-2(q497) gld-1(q485) background at young adult stage, comparing to glp-1(q175) null allele.
- WBPaper00047132:glp-1(ts)-25C_upregulated_skn-1-dependent
Fold change > 4.0 for glp-1(ts) regulated genes, and fold change < 0.67 for skn-1(RNAi) regulated genes.
Genes with >4.0 fold increased expression in glp-1(ts) animals comparing to in N2 control at 25 centigrade, and the change was dependent on skn-1(RNAi). fold change FC1 > 4.0 for glp-1(ts) + vector vs. N2 + vector; fold change FC2 < 0.67 for glp-1(ts) + skn-1 RNAi vs. glp-1(ts) + vector
- WBPaper00060278:atp-2(RNAi)_upregulated
Cufflinks 2.2.1
Transcripts that showed significantly increased expression in glp-4(bn2);atp-2(RNAi), comparing to in glp-4(bn2) animals injected with empty vector.
- WBPaper00047132:glp-1(ts)-25C_upregulated
Fold change > 4.0 for glp-1(ts) regulated genes, and fold change < 0.67 for skn-1(RNAi) regulated genes.
Genes with >4.0 fold increased expression in glp-1(ts) animals comparing to in N2 control at 25 centigrade. fold change = glp-1(ts) + vector vs. N2 + vector.
- WBPaper00047132:skn-1(RNAi)_downregulated_glp-1(ts)-dependent
Fold change > 4.0 for glp-1(ts) regulated genes, and fold change < 0.67 for skn-1(RNAi) regulated genes.
Genes with < 0.67 fold decreased expression in skn-1(RNAi) animals comparing to in N2 control at 25 centigrade. Fold change = glp-1(ts) + skn-1 RNAi vs. glp-1(ts) + vector