Effect of low-dose arsenite (Schmeisser 2013)

GSE46257: Deep sequencing of endogenous mRNA from Caenorhabditis elegans in the presence and absence of arsenite

Comparison of life stages (Hillier 2009)

Deep sequencing of nematode transcriptomes using RNA isolated from various developmental stages under various experimental conditions

Expression across Sexes and Life stages (Choi 2011)

A deep sequencing approach to comparatively analyze the transcriptome of lifecycle stages of the filarial worm, Brugia malayi.

modENCODE Integrative analysis (Gerstein 2010)

Deep sequencing of the Caenorhabditis elegans transcriptome using RNA isolated from various developmental stages under various experimental conditions RW0001

Mitochondrial inhibitor rotenone (Schmeisser 2013)

GSE46051: Deep sequencing of endogenous mRNA from Caenorhabditis elegans in the presence and absence of rotenone at 4 different time points

Effect of nicotinic acid and methylnicotinamide (Schmeisser 2013)

GSE49662: Deep sequencing of endogenous mRNA from Caenorhabditis elegans in the presence and absence of 1-methylnicotinamide (MNA) and nicotinic acid (NA)

Binding sites for the transcription factor: 'ALY-2' in life-stage: 'L1 larva' using Anti-eGFP antibody (Snyder_ALY-2_GFP_L1)

We are identifying the DNA binding sites for 300 transcription factors in C. elegans. Each transcription factor gene is tagged with the same GFP fusion protein, permitting validation of the gene's correct spatio-temporal expression pattern in transgenic animals. Chromatin immunoprecipitation on each strain is peformed using an anti-GFP antibody, and any bound DNA is deep-sequenced using Solexa GA2 technology.

Binding sites for the transcription factor: 'ALY-2' in life-stage: 'L3 larva' using Anti-eGFP antibody (Snyder_ALY-2_GFP_L3)

We are identifying the DNA binding sites for 300 transcription factors in C. elegans. Each transcription factor gene is tagged with the same GFP fusion protein, permitting validation of the gene's correct spatio-temporal expression pattern in transgenic animals. Chromatin immunoprecipitation on each strain is peformed using an anti-GFP antibody, and any bound DNA is deep-sequenced using Solexa GA2 technology.

Binding sites for the transcription factor: 'AMA-1' in life-stage: 'L3 larva' using anti-RNA Polymerase II antibody (Snyder_HLH-8_POLII_L3)

We are identifying the DNA binding sites for 300 transcription factors in C. elegans. Each transcription factor gene is tagged with the same GFP fusion protein, permitting validation of the gene's correct spatio-temporal expression pattern in transgenic animals. Chromatin immunoprecipitation on each strain is peformed using an anti-Polymerase II antibody, and any bound DNA is deep-sequenced using Solexa GA2 technology.

Binding sites for the transcription factor: 'CEH-26' in life-stage: 'elongating embryo' using Anti-eGFP antibody (Snyder_CEH-26_GFP_LE)

We are identifying the DNA binding sites for 300 transcription factors in C. elegans. Each transcription factor gene is tagged with the same GFP fusion protein, permitting validation of the gene's correct spatio-temporal expression pattern in transgenic animals. Chromatin immunoprecipitation on each strain is peformed using an anti-GFP antibody, and any bound DNA is deep-sequenced using Solexa GA2 technology.