expression cluster: WBPaper00041207:PP_dauer_down The weight parameters were optimized based on MA-plots such that spike-in controls show their expected fold change values. lmFit function was used to fit a linear model to probe intensities across arrays, and differential expression was calculated by empirical Bayes method using the eBayes function. Control of FDR was employed as correction for multiple testing.
Pristionchus pacificus genes down regulated in the dauer versus dauer-exit worms.
expression cluster: WBPaper00041207:PP_dauer_up The weight parameters were optimized based on MA-plots such that spike-in controls show their expected fold change values. lmFit function was used to fit a linear model to probe intensities across arrays, and differential expression was calculated by empirical Bayes method using the eBayes function. Control of FDR was employed as correction for multiple testing.
Pristionchus pacificus genes up regulated in the dauer versus dauer-exit worms.